Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq37454 96.9 1e-15 >seq37454 Length=405 Score = 96.9 bits (106), Expect = 1e-15 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 41355 GAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCG 41414 || || ||||| || ||||| || ||||| |||||||| || || || || || || ||| Sbjct 397 GATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCG 338 Query 41415 ATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACC 41473 || || || ||| | || || || | ||| | || ||||| | ||||||||||| || Sbjct 337 ATAATAAATACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCC 279 Query 41474 TACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | ||| || ||||| || ||||| || | ||||||||| || Sbjct 278 AATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143436116219496