Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq37454 111 2e-19 >seq37454 Length=405 Score = 111 bits (122), Expect = 2e-19 Identities = 117/149 (79%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 68659 AGAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATG 68718 || || || |||| ||||||||||||||||||||| || || || || || ||||| ||| Sbjct 403 AGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATG 344 Query 68719 AAGGCGACGATGAA-ACAGATGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGA 68776 || |||| || || ||||| ||||| | ||| || ||||||||||||| || || | Sbjct 343 AAAGCGATAATAAATACAGA-AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAA 286 Query 68777 ACCAACCAACGTAAAGGCGGTTCTCTGTG 68805 |||| |||| |||||| ||||| || ||| Sbjct 285 ACCATCCAATGTAAAGACGGTTTTCAGTG 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570938579290080