Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq64789 140 3e-28 >seq64789 Length=32879 Score = 140 bits (154), Expect = 3e-28 Identities = 134/172 (78%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || || || || ||||||||||| || | |||| |||||| || || ||||| || || Sbjct 16652 AGATCGGTTTCGGGGTTGTCACACTCGGAGCACAGCACAAATTTCCGTATGAACCCGTCG 16711 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| | ||| || ||||||||||||||||||||| | || ||||||||| Sbjct 16712 AGCATGTCCTGCAGCTTGTTGGCCTCGTGGGAGCCGTTGACGATGTAGCGGTCGTTTTTG 16771 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 |||||| ||| || || |||||||| || || || || |||| ||||||| Sbjct 16772 GAATCGAACTGGGTCTGAGCGCCCAGTTCACAACCAAAAAACTTGGTCGGGT 16823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412056463521692