Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12-
02] 156,044 sequences; 695,008,792 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq88123 114 2e-20
seq113693 98.7 2e-15
>seq88123
Length=68930
Score = 114 bits (126), Expect = 2e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444
|||||||||| | | |||||||| || |||||| | || |||||||||||||| || ||
Sbjct 36322 TGGTGGTACTTTGTCTCTAAAGGCATTGAATACCTGGACACAGTGTTTTTCATTCTGAGA 36381
Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504
|||||||| || || || | ||| || ||||| || || || | || ||||| ||| |
Sbjct 36382 AAAAAGTTCAACCAGGTGACCTTCCTGCACGTGTACCACCACTGCACCATGTTCACTCTG 36441
Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540
| ||| | || || |||||| | |||||||| |||
Sbjct 36442 TGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 36477
>seq113693
Length=57424
Score = 98.7 bits (108), Expect = 2e-15
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444
||||||||||| || |||||||| | || | || || || || |||||||| | |||
Sbjct 22105 TGGTGGTACTACATCTCTAAAGGAGTGGAGTTTTTGGACACTGTATTTTTCATTTTGAGG 22046
Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504
|||||||| || || ||||| ||||||||||| || ||||| | || ||||| | |
Sbjct 22045 AAAAAGTTCAACCAAGTTAGTTTTCTACACGTCTACCATCACTGCACCATGTTCATCCTG 21986
Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGG 58541
| ||| | || || |||||| | | ||||| ||||
Sbjct 21985 TGGTGGATTGGCATCAAATGGGTCCCCGGAGGACAGG 21949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 901649051283840
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |