Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq130048 125 7e-24 >seq130048 Length=4274 Score = 125 bits (138), Expect = 7e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| |||||||| || ||||| ||| | ||| ||| || ||||| Sbjct 2172 ATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGCTG 2231 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || |||| |||||| || ||||| |||||||||||||| |||||| Sbjct 2232 CTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTT 2291 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | |||| |||||| |||||||||| || | |||| ||| || || || Sbjct 2292 GGCCTTCACATTTTCAATGGTGTCGCTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGT 2351 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || |||||||| Sbjct 2352 GAGGGTTTTCACAAAGATCTGCAT 2375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482477863558560