Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq137474 102 3e-18 seq155225 98.7 3e-17 seq129087 98.7 3e-17 seq114536 98.7 3e-17 seq86793 98.7 3e-17 seq73850 98.7 3e-17 seq60293 98.7 3e-17 seq70598 78.8 3e-11 >seq137474 Length=24872 Score = 102 bits (112), Expect = 3e-18 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 2756 TACTGTGTTTAT-GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGG 2814 |||| | | ||| ||| ||| |||||||||||||||||| |||||||||||||||||||| Sbjct 20128 TACTTTATCTATAGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGG 20069 Query 2815 TCCCTGGTTCAACCCCGGGCTTCAGC 2840 |||||||||| | |||||| ||| || Sbjct 20068 TCCCTGGTTCGATCCCGGGTTTCGGC 20043 >seq155225 Length=941 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 303 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 244 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 243 CCGGGTTTCGGC 232 >seq129087 Length=6851 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 793 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 734 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 733 CCGGGTTTCGGC 722 >seq114536 Length=4893 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2588 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2529 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2528 CCGGGTTTCGGC 2517 >seq86793 Length=36850 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 18577 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 18636 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 18637 CCGGGTTTCGGC 18648 >seq73850 Length=16596 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 11308 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 11367 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 11368 CCGGGTTTCGGC 11379 >seq60293 Length=41788 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 36610 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 36669 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 36670 CCGGGTTTCGGC 36681 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 37880 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 37939 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 37940 CCGGGTTTCGGC 37951 >seq70598 Length=1751 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 89 GAAGT-GATCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 41 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 225 GAAGT-GATCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 177 Score = 78.8 bits (86), Expect = 3e-11 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GAAGT-GATCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15822548992380