Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq63492 102 1e-16 >seq63492 Length=65416 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 214085 TTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATC 214144 ||||| |||| ||||| ||| || || || ||||| ||||| ||||||||| ||| Sbjct 11945 TTCGCGGTGGGACACGAGGCGTTCGGCCTGGTCCCCGGCCTCATGATGTACGCCACCATC 11886 Query 214145 TGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAAC 214204 ||||| | ||||||||| |||| ||||||||||| || | | |||||| | ||| || Sbjct 11885 TGGCTCCGCGAGCACAACCGGGTGTGCGACGTGCTCAAGGAGGTGCACCCCTACTGGGAC 11826 Query 214205 GACGAACAGCTGTTCCAGA 214223 ||||| ||| ||||||| Sbjct 11825 GACGAGAGGCTCTTCCAGA 11807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 721929887602560