Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq89222 91.5 1e-13 >seq89222 Length=38626 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||| |||| || || ||| | |||||||| || || ||| ||||||| ||||| Sbjct 34530 ATGGCTCTGCCCCCGTGCCATGCTCTTTGTCAGTTCTATGTGTGCGATGGTGAGCTGTCT 34471 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 || || | ||||| | || ||||||||||| || || || || || || || || || Sbjct 34470 TGCCAGCTTTATCAGCGCTCTGGTGACATGGGTCTGGGAGTACCTTTCAATATTGCCAGC 34411 Query 41169 TATGCTCTGCTCACGTATATGATTGCACAC 41198 ||||| || || || |||||||| || ||| Sbjct 34410 TATGCACTTCTAACATATATGATCGCCCAC 34381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396700123644220