Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12-
02] 156,044 sequences; 695,008,792 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq88123 122 1e-22
seq113693 86.0 8e-12
>seq88123
Length=68930
Score = 122 bits (134), Expect = 1e-22
Identities = 124/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729
||| |||||| || ||| |||||||||| || ||||| || || || | || |||||
Sbjct 36316 GCCCTGTGGTGGTACTTTGTCTCTAAAGGCATTGAATACCTGGACACAGTGTTTTTCATT 36375
Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789
||||||| || || ||||| || | ||| ||||||| |||||||| | ||||||||
Sbjct 36376 CTGAGAAAAAAGTTCAACCAGGTGACCTTCCTGCACGTGTACCACCACTGCACCATGTTC 36435
Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831
||| | | ||||| || || |||||| | ||||||||||||
Sbjct 36436 ACTCTGTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 36477
>seq113693
Length=57424
Score = 86.0 bits (94), Expect = 8e-12
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 32688 ATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGAGAAAGAAATTTAAC 32747
||||||||||| | || | | | || ||| | || ||||| |||| || || || |||
Sbjct 22093 ATCTCTAAAGGAGTGGAGTTTTTGGACACTGTATTTTTCATTTTGAGGAAAAAGTTCAAC 22034
Query 32748 CAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTTTAGGATGGATAGGG 32807
|||||||| ||| | ||||| ||||| || | |||||||| | | | ||||| ||
Sbjct 22033 CAAGTTAGTTTTCTACACGTCTACCATCACTGCACCATGTTCATCCTGTGGTGGATTGGC 21974
Query 32808 ATTAAATGGTTTGCAGGAGGACAGG 32832
|| |||||| | | ||||||||||
Sbjct 21973 ATCAAATGGGTCCCCGGAGGACAGG 21949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602004265690560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |