Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq130048 84.2 2e-11 >seq130048 Length=4274 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | || || || || || ||||| || || || || |||| Sbjct 2377 CCACCTCTGAGGCGCAGGACTAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAGTCGGAG 2436 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || |||||||||||||| ||||| || || | |||||| || | ||| Sbjct 2437 AGAGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 2496 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| ||| || || | | | | || || || | ||| || Sbjct 2497 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTTCAATAGTGTCACTGGGCTCAACC 2556 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTACGCC 39293 || | ||||| |||| || || || || || |||||||||||||| || |||| Sbjct 2557 TCAAGGGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCATGTTGGCGCC 2612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428728696084172