Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4343 172 6e-38 >seq4343 Length=2653754 Score = 172 bits (190), Expect = 6e-38 Identities = 137/165 (83%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 145761 GTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCC 145820 |||||| | ||||||||| ||||||| ||||||||| ||||||||||| || || || || Sbjct 516829 GTGGGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGTACGCCGAGGCC 516888 Query 145821 CATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTG 145880 |||||| |||| |||||||||||||||||||| ||||||||| | |||||||||||| Sbjct 516889 CATGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCCCGTCGCTCACGTAGAACTG 516948 Query 145881 GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||| ||||||||| |||| ||||| ||| ||||| || Sbjct 516949 GCACAGAGCGTGGCAGGGGGGCAAAGCCATCAGGGGAAGGTCTGC 516993 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106 || || ||||| | ||||||||| |||||||| ||||||||||| || ||| ||| | Sbjct 518050 GCTCCAAAGTGGCGCCACTGGAAACCGTAGACAGGCCCCAGGTCACCCTCCTCTCTGGAC 518109 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 | ||| | | | ||||| || || ||||| ||||| |||||||||||||||||| Sbjct 518110 GTGAACCCATTCTTGTCCAGGAATTCACGAGACCCATTGGCATCCCAGATCTTGACGCCC 518169 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || | || ||||| |||| | ||||| ||| Sbjct 518170 TTCTCAGAAAGCTCCTTGGCATTGGTGGAGCCC 518202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590041255248760