Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq4299 91.5 1e-13 >seq4299 Length=10599567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890 ||||||||| ||||| || || | || ||||| || || ||| | || || ||| | || Sbjct 10426107 CATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACCATCACCCTGGAGGTTGAACCCAG 10426166 Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950 ||||| | || | || || | ||||| | ||||||||| | || |||||| Sbjct 10426167 CGACACAATTGAGAACGTGAAAGCGAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCA 10426226 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 ||| | | || | ||| ||||| |||||||||||| | || || ||| |||| Sbjct 10426227 GCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGTCCGACTACAA 10426286 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCAAT 25063 ||| ||||| ||| |||| ||||| | ||| | || | | ||||| |||| Sbjct 10426287 CATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGTCTCAGGGGAGGGCAAT 10426339 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890 ||||||||| ||||| || || | || ||||| || || ||| | || || ||| | || Sbjct 10425879 CATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACCATCACCCTGGAGGTTGAACCCAG 10425938 Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950 ||||| | || | || || | ||||| | ||||||||| | || |||||| Sbjct 10425939 CGACACAATTGAGAACGTGAAAGCGAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCA 10425998 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 ||| | | || | ||| ||||| |||||||||||| | || || ||| |||| Sbjct 10425999 GCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGTCCGACTACAA 10426058 Query 25011 CATACAGAAAGAGGCCACGCTTCA 25034 ||| ||||| ||| |||| ||||| Sbjct 10426059 CATCCAGAAGGAGTCCACTCTTCA 10426082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418279432352480