Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq3989 93.3 4e-14 >seq3989 Length=9007450 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || || || || || || ||||| || ||||| | || ||||||| || | ||||| Sbjct 3293031 TCATCCCTGCTAATGAGCTCATTGGAGAATGTGAGACCAGGCATCAGGCCCCTCTTTTTC 3293090 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| || || ||||||||||| ||||| ||||| ||||| ||||| || ||||| || Sbjct 3293091 AACCAGAAAATTGCAGCAAATGACCCAGAGAAGAAAATTCCTTCCACTGCAGCAAAGGCC 3293150 Query 11774 ACTACTCTTTCTCC 11787 ||||| | ||| || Sbjct 3293151 ACTACACGTTCACC 3293164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468496577237360