Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq4343 149 5e-31 >seq4343 Length=2653754 Score = 149 bits (164), Expect = 5e-31 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || | | ||| || |||| || || || |||||||||||||||||||| || | Sbjct 516816 TCAGCCCTGCAATGTGGGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGG 516875 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || |||||||||||||| || |||| ||||||||||||||||||||||||||| Sbjct 516876 GTACGCCGAGGCCCATGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCCCGTCGC 516935 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 |||||| ||||| |||| | |||| || || || | ||||||| | | ||||| |||| Sbjct 516936 TCACGTAGAACTGGCACAGAGCGTGGCAGGGGGGCAAAGCCATCAGGGGAAGGTCTGCGG 516995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427750876047120