Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq4299 82.4 6e-11 >seq4299 Length=10599567 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| ||||| || || || |||||||| ||| || | | | ||||| | ||| Sbjct 10426082 TGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGTTGC 10426023 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279 |||||||| | |||| | || ||||| ||||| ||||||||||| ||||| Sbjct 10426022 TTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTTC 10425963 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || || | || || || ||||| ||| || || | ||| ||||| || || || Sbjct 10425962 GCT-TTCACGTTCTCAATTGTGTCGCTGGGTTCAACCTCCAGGGTGATGGTCTTGCCCGT 10425904 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || ||||| Sbjct 10425903 GAGCGTCTTCACAAAGATCTGCAT 10425880 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| ||||| || || || |||||||| ||| || | | | ||||| | ||| Sbjct 10426310 TGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGTTGC 10426251 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279 |||||||| | |||| | || ||||| ||||| ||||||||||| ||||| Sbjct 10426250 TTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTTC 10426191 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || || | || || || ||||| ||| || || | ||| ||||| || || || Sbjct 10426190 GCT-TTCACGTTCTCAATTGTGTCGCTGGGTTCAACCTCCAGGGTGATGGTCTTGCCCGT 10426132 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || ||||| Sbjct 10426131 GAGCGTCTTCACAAAGATCTGCAT 10426108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362157928649679