Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq4299 86.0 4e-12 >seq4299 Length=10599567 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/214 (69%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||||| || | || ||||| || || || ||||| || |||| || | || || Sbjct 10426089 CACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 10426030 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC--- 33276 || |||||| ||| ||| || | | |||||||| | || ||||||||||| || Sbjct 10426029 CAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTG 10425970 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | | |||| ||| || | | ||| |||||| |||||| ||| ||||| || || || Sbjct 10425969 GATTTTCGC---TTTCACGTTCTCAATTGTGTCGCTGGGTTCAACCTCCAGGGTGATGGT 10425913 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || ||||| || || || || || || |||||| Sbjct 10425912 CTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 10425879 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/214 (69%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||||| || | || ||||| || || || ||||| || |||| || | || || Sbjct 10426317 CACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 10426258 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC--- 33276 || |||||| ||| ||| || | | |||||||| | || ||||||||||| || Sbjct 10426257 CAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTG 10426198 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | | |||| ||| || | | ||| |||||| |||||| ||| ||||| || || || Sbjct 10426197 GATTTTCGC---TTTCACGTTCTCAATTGTGTCGCTGGGTTCAACCTCCAGGGTGATGGT 10426141 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || ||||| || || || || || || |||||| Sbjct 10426140 CTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 10426107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318758877693462