Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq4299 89.7 4e-13 >seq4299 Length=10599567 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || ||| | || ||||| ||||| ||| |||| ||||||||| Sbjct 10425880 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACCATCACCCTGGAGGTTGAACCCAGC 10425939 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||| ||||| |||||||||||| |||| || || Sbjct 10425940 GACACAATTGAGAACGTGAAAGCGAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAG 10425999 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | ||| ||||| ||| |||||||| || || |||| || || Sbjct 10426000 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGTCCGACTACAAC 10426059 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || || || || || || || | ||| | ||||| | || |||| Sbjct 10426060 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGTCTCAGGGGGGGCA 10426108 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || ||| | || ||||| ||||| ||| |||| ||||||||| Sbjct 10426108 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACCATCACCCTGGAGGTTGAACCCAGC 10426167 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||| ||||| |||||||||||| |||| || || Sbjct 10426168 GACACAATTGAGAACGTGAAAGCGAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAG 10426227 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | ||| ||||| ||| |||||||| || || |||| || || Sbjct 10426228 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGTCCGACTACAAC 10426287 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGG-TGGCAATAA 111419 || || || || || || || || | ||| | ||||| | || |||||||| Sbjct 10426288 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGTCTCAGGGGAGGGCAATAA 10426341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423015154199800