Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3898 87.8 2e-12 seq3989 86.0 7e-12 seq4702 84.2 3e-11 >seq3898 Length=2399012 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558 ||||||||| |||||||| | || || ||||| | ||| | |||||||||||| Sbjct 243235 CTCATCCTTGCTGGTGTACTCCACAACCTCTGTACATAGATTGCTGCACTTAATGGTGCC 243176 Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618 || ||||| || || ||| || || ||||||||||| ||||||||||| || || Sbjct 243175 CAGGTTCTGCTGGTTGCTCTTCCGATTGCAGGCATCCTTGTAGAGCATGTATGGTGTGCC 243116 Query 114619 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 ||||| || || |||| || | ||| | ||| Sbjct 243115 AGTCTCTGTCTGAGACTCGATCACAGCATACCA 243083 >seq3989 Length=9007450 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 126080 ATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 126139 ||||| ||||| ||||| || || ||||| || |||| ||| |||||||||||||| Sbjct 3293043 ATGAGCTCATTGGAGAATGTGAGACCAGGCATCAGGCCCCTCTTTTTCAACCAGAAAATT 3293102 Query 126140 GCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||| || |||||||| ||||| ||||| Sbjct 3293103 GCAGCAAATGACCCAGAGAAGAAAATTCCTTCCAC 3293137 >seq4702 Length=3596321 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 |||| || | | ||| |||||||| ||| | || |||||||||||||||| ||||| Sbjct 2019927 CCTCATCTCTGCTGATCAGTTCATTGGAGTATGTGAGCCCTGGCATGAGACCCCTCTTCT 2019986 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||| | || || ||| || || || ||||||||||||||||| Sbjct 2019987 TCAGCCAGTAGATTGCCGCAAAGGACCCAGAAAAGAAGATTCCCTCCAC 2020035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597317616912520