Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4299 118 4e-21 seq3913 114 5e-20 seq4012 87.8 7e-12 >seq4299 Length=10599567 Score = 118 bits (130), Expect = 4e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| |||| ||||||||||| || || || ||||| ||| | ||||| || || ||| Sbjct 6916017 GTTACCAATGCTGTAATTACTGTGCCAGCATACTTCAACGATTCTCAACGTCAGGCTACT 6915958 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||||||| ||| | || || |||||||| ||||| || ||||| || ||||| Sbjct 6915957 AAAGATGCAGGAACAATTTCGGGCTTGAATGTTCTGCGAATCATCAATGAGCCAACAGCT 6915898 Query 451433 GCTGCTCTAGCATATGGACT 451452 |||||| | || ||||| || Sbjct 6915897 GCTGCTATTGCCTATGGCCT 6915878 Score = 91.5 bits (100), Expect = 6e-13 Identities = 113/151 (75%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 451310 CCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 || ||||| |||| || || || || || || || |||||||| | || || ||||| Sbjct 6936126 CCTGTTACAAATGCTGTTATAACAGTACCAGCCTACTTCAATGACTCCCAGCGCCAAGCC 6936185 Query 451370 ACTAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTAC 451428 || || ||||| || ||| ||| |||| ||||||| || ||||| ||||||||||| || Sbjct 6936186 ACCAAGGATGCTGGTACA-ATTTCTGGGCTAAATGTACTACGAATAATTAATGAACCAAC 6936244 Query 451429 AGCAGCTGCTCTAGCATATGGACTAGGAAAA 451459 || ||||| | ||||| || || ||| || Sbjct 6936245 TGCTGCTGCCATTGCATACGG-CTTGGATAA 6936274 >seq3913 Length=1546322 Score = 114 bits (126), Expect = 5e-20 Identities = 182/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 451192 AGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGA 451251 |||||| ||| | |||| ||| | || ||||| || || ||| | ||| || ||||| Sbjct 689644 AGGAAAACCCAAAGTTCAGGTAGAGTACAAAGGAGAGACCAAAGCATTTTACCCGGAAGA 689585 Query 451252 AATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCC 451311 ||| || || ||||| || |||||||| || | || || || | || Sbjct 689584 AATCTCCTCCATGGTGCTGGTAAAAATGAAGGAGATTGCTGAGGCGTACCTGGGACAGAA 689525 Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 || | ||||||| || || || ||||| || |||||||| | || || || || || Sbjct 689524 GGTGTCCAATGCAGTCATCACGGTGCCCGCCTACTTCAATGACTCGCAGCGCCAGGCCAC 689465 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||||||||| ||| |||||||| | ||||| || | || || |||||||| ||||| Sbjct 689464 TAAAGATGCTGGAGTGATTGCTGGGCTGAATGTGCTCAGGATCATCAATGAACCCACAGC 689405 Query 451432 AGCTGCTCTAGCATATGGACT 451452 ||||||| | || ||||| || Sbjct 689404 AGCTGCTATTGCTTATGGTCT 689384 Score = 105 bits (116), Expect = 3e-17 Identities = 333/511 (65%), Gaps = 4/511 (1%) Strand=Plus/Minus Query 451982 AAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA 452041 |||||| | ||||| |||||||| || |||||||| || || || || ||||| || || Sbjct 688857 AAGAGCATCAATCCAGATGAAGCGGTGGCATATGGGGCAGCTGTACAGGCAGCCATCCTC 688798 Query 452042 ACAGGTT-CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATC 452100 | ||| || | ||| || | || | ||| | | ||||| ||||||| || Sbjct 688797 ATGGGTGACACCTC-TGAGAACATCCAGGACCTGCTGCTGCTGGATGTGGCACCTCTGTC 688739 Query 452101 TCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTAT 452160 ||| || |||| ||||| |||||| | |||||| | | || ||||| || | || Sbjct 688738 TCTGGGTATTGAGACAGCAGGTGGAGTCATGACTCCTCTCATCAAACGCAACACCACCAT 688679 Query 452161 TCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTAT 452220 || ||| | | || ||||| | ||| || ||||| ||||| || || Sbjct 688678 CCCCACCAAACAAACCCAGACATTCACTACGTACTCAGACAACCAGCCAGGAGTCTTGAT 688619 Query 452221 TCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTAC 452280 || || | |||||| ||| | || ||||| || || || || || | ||| Sbjct 688618 CCAGGTATATGAAGGCGAAAGAGCCATGACCAAGGACAACAACTTGCTGGGCAAGTTTGA 688559 Query 452281 TCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGT 452340 || | ||| |||||| || | ||| || ||||| ||| | |||| || | Sbjct 688558 ACTCACTGGCATCCCTCCTGCCCCGCGAGGAGTCCCCCAAATCGAAGTGACCTTCGACAT 688499 Query 452341 TGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-A 452399 |||||||||||| || || ||||| |||||| || || | || ||| |||| | Sbjct 688498 TGATGCAAATGGGATCCTGAATGTTTCTGCAGTGGACAAGAGTACCGGTAAA-GAGAACA 688440 Query 452400 AAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAG 452459 | || || || || || || || ||| | || || |||||||| | ||||| Sbjct 688439 AGATCACCATCACCAACGACAAGGGCCGCCTCAGCAAGGAGGATATTGAGAGGATGGTGC 688380 Query 452460 ATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 | ||||| ||||||| ||||| ||||||| Sbjct 688379 AGGAAGCCGAAAAATACAAGGCCAATGATGA 688349 >seq4012 Length=935771 Score = 87.8 bits (96), Expect = 7e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || ||||| || || || || |||||||| | || || ||||| || || ||||| Sbjct 173403 GCTGTCATTACGGTACCTGCCTACTTCAATGACTCTCAGCGACAAGCCACCAAGGATGCT 173462 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||| ||| |||| | |||||| | || || || ||||||||||| ||||| ||| | Sbjct 173463 GGAACGATTTCTGGGCTTAATGTTTTACGTATCATCAATGAACCTACTGCAGCAGCTATT 173522 Query 451442 GCATATGGACT 451452 |||||||| || Sbjct 173523 GCATATGGCCT 173533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975596412354452