Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3898 100 3e-16 seq4702 87.8 2e-12 >seq3898 Length=2399012 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 ||||||||| |||||||| | || |||||||| | ||| | |||||| || || Sbjct 243235 CTCATCCTTGCTGGTGTACTCCACAACCTCTGTACATAGATTGCTGCACTTAATGGTGCC 243176 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| ||||| |||||||||||||||||||| || || || Sbjct 243175 CAGGTTCTGCTGGTTGCTCTTCCGATTGCAGGCATCCTTGTAGAGCATGTATGGTGTGCC 243116 Query 106612 CGTCTCCGTCTGTGACTTGA 106631 ||||| ||||| |||| || Sbjct 243115 AGTCTCTGTCTGAGACTCGA 243096 >seq4702 Length=3596321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||| | || |||||||| ||| | || |||||||||||||||| ||||| Sbjct 2019927 CCTCATCTCTGCTGATCAGTTCATTGGAGTATGTGAGCCCTGGCATGAGACCCCTCTTCT 2019986 Query 117353 TCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401 ||| ||| || || | |||| || ||||| || |||||||| |||||||| Sbjct 2019987 TCAGCCAGTAGATTGCCGCA-AAGGACCCAGAAAAGAAGATTCCCTCCAC 2020035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589945261031560