Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4702 102 2e-16 seq3898 93.3 8e-14 >seq4702 Length=3596321 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || || ||| |||||||||||||||| |||||||| ||||| || || || |||||| Sbjct 2020062 GGGGAACGGTTGGTAGCCTTTGCTGCAGTGGAGGGAATCTTCTTTTCTGGGTCCTTTGCG 2020003 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 || |||| |||||| ||| ||| ||| |||||| ||||| | ||||| || || Sbjct 2020002 GCAATCTACTGGCTGAAGAAGAGGGGTCTCATGCCAGGGCTCACATACTCCAATGAACTG 2019943 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 2019942 ATCAGCAGAGATGAGG 2019927 >seq3898 Length=2399012 Score = 93.3 bits (102), Expect = 8e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 ||||| |||||| |||| |||| | | ||||||||| || ||||||||||| ||||| Sbjct 243237 ACCTCATCCTTGCTGGTGTACTCCACAACCTCTGTACATAGATTGCTGCACTTAATGGTG 243178 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCG 221851 ||||||| | || || ||| |||||| || |||||||||||||| | || | Sbjct 243177 CCCAGGTTCTGCTGGTTGCTCTTCCGATTGCAGGCATCCTTGTAGAGCATGTATGGTGTG 243118 Query 221852 CCAGTCTCCAGCTGAG 221867 |||||||| ||||| Sbjct 243117 CCAGTCTCTGTCTGAG 243102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928788848711360