Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3898 96.9 4e-15 seq4702 87.8 2e-12 >seq3898 Length=2399012 Score = 96.9 bits (106), Expect = 4e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | ||| | || | || ||||| |||||||| |||||||| ||||| ||||||||| Sbjct 243083 TGGTATGCTGTGATCGAGTCTCAGACAGAGACTGGCACACCATACATGCTCTACAAGGAT 243142 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || || || |||||| ||||| |||| |||| || || ||| || ||||| || Sbjct 243143 GCCTGCAATCGGAAGAGCAACCAGCAGAACCTGGGCACCATTAAGTGCAGCAATCTATGT 243202 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || || | |||||||| ||||||||| Sbjct 243203 ACAGAGGTTGTGGAGTACACCAGCAAGGATGAG 243235 >seq4702 Length=3596321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGG 65159 |||||||| |||||||| || ||||| || |||| | || || ||| |||||||| |||| Sbjct 2020035 GTGGAGGGAATCTTCTTTTCTGGGTCCTT-TGCGGCAATCTACTGGCTGAAGAAGAGGGG 2019977 Query 65160 TCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGG 65209 |||||||||||| || | ||| |||||||| || | ||||||||| Sbjct 2019976 TCTCATGCCAGGGCTCACATACTCCAATGAACTGATCAGCAGAGATGAGG 2019927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596533664138720