Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4299 105 2e-17 >seq4299 Length=10599567 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || |||||||| || || || ||||| |||| || ||| ||| Sbjct 10425883 CAGATCTTTGTGAAGACGCTCACGGGCAAGACCATCACCCTGGAGGTTGAACCCAGCGAC 10425942 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||| || || || |||||||| ||| || ||| || Sbjct 10425943 ACAATTGAGAACGTGAAAGCGAAA-ATCCAGGACAAAGAAGGCATTCCTCCTGACCAGCA 10426001 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || ||||| || || ||||| |||||||||| | || || |||| |||||| | Sbjct 10426002 GAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGTCCGACTACAACAT 10426061 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||| ||||| ||||||||||| || Sbjct 10426062 CCAGAAGGAGTCCACTCTTCACCTGGT 10426088 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || |||||||| || || || ||||| |||| || ||| ||| Sbjct 10426111 CAGATCTTTGTGAAGACGCTCACGGGCAAGACCATCACCCTGGAGGTTGAACCCAGCGAC 10426170 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||| || || || |||||||| ||| || ||| || Sbjct 10426171 ACAATTGAGAACGTGAAAGCGAAA-ATCCAGGACAAAGAAGGCATTCCTCCTGACCAGCA 10426229 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || ||||| || || ||||| |||||||||| | || || |||| |||||| | Sbjct 10426230 GAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGTCCGACTACAACAT 10426289 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||| ||||| ||||||||||| || Sbjct 10426290 CCAGAAGGAGTCCACTCTTCACCTGGT 10426316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181747830321299