Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq3938 104 7e-19 seq4643 100 9e-18 seq4097 100 9e-18 seq3893 100 9e-18 seq4732 98.7 3e-17 seq4310 98.7 3e-17 seq4205 98.7 3e-17 seq3987 98.7 3e-17 seq3926 98.7 3e-17 seq3912 98.7 3e-17 seq3961 96.9 1e-16 seq4119 91.5 5e-15 seq4010 91.5 5e-15 >seq3938 Length=3534264 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 3296902 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 3296961 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3296962 CCGGGTTTCGGC 3296973 >seq4643 Length=11069196 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 5303640 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 5303699 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 5303700 CCCGGGTTTCGGC 5303712 >seq4097 Length=2680758 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 937160 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 937219 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 937220 ATCCCGGGTTTCGGC 937234 >seq3893 Length=5635105 Score = 100 bits (110), Expect = 9e-18 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2761 TGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820 ||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 3526271 TGTATACTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTG 3526212 Query 2821 GTTCAACCCCGGGCTTCAGC 2840 |||| | |||||| ||| || Sbjct 3526211 GTTCGATCCCGGGTTTCGGC 3526192 >seq4732 Length=5177925 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2628974 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2629033 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2629034 CCGGGTTTCGGC 2629045 >seq4310 Length=11279338 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 9368721 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9368662 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 9368661 CCGGGTTTCGGC 9368650 Score = 93.3 bits (102), Expect = 1e-15 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||| Sbjct 9368902 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCTTGGTTCAATCCCG 9368843 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 9368842 GGTTTCGGC 9368834 >seq4205 Length=8961471 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6806689 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6806630 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 6806629 CCGGGTTTCGGC 6806618 >seq3987 Length=5478028 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct 1179802 GCCGAAATAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1179743 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1179742 CCGGGTTTCGGC 1179731 >seq3926 Length=8898194 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 481892 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 481951 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 481952 CCGGGTTTCGGC 481963 Score = 86.0 bits (94), Expect = 2e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCC 2817 || |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7518167 ATTGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGGCC 7518116 >seq3912 Length=9171075 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 7182956 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 7182897 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 7182896 CCGGGTTTCGGC 7182885 >seq3961 Length=3054985 Score = 96.9 bits (106), Expect = 1e-16 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 2770 CTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCC 2829 ||||| |||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct 1919954 CTGAAATAGCTCAGCTGGGAGAGCGTTAAACTGAAGCTCTAAAGGTCCCTGGTTCAACCC 1919895 Query 2830 CGGGCTTCAGC 2840 |||| ||| || Sbjct 1919894 CGGGTTTCGGC 1919884 >seq4119 Length=3091371 Score = 91.5 bits (100), Expect = 5e-15 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || ||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 711 AAATAGTTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTCGTTCAACCCCGG 770 Query 2833 GCTTCAGC 2840 | ||| || Sbjct 771 GTTTCGGC 778 >seq4010 Length=905225 Score = 91.5 bits (100), Expect = 5e-15 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| || ||||| ||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 1492 GCTGAAATACCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAAGTCCCTGGTTCAACC 1433 Query 2829 CCGGGCTT 2836 || || || Sbjct 1432 CCTGGTTT 1425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848764602255