Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4299 86.0 5e-12 >seq4299 Length=10599567 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| | ||||| || || || || Sbjct 10426076 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGTTGCTTGCCA 10426017 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | ||| || || || || | || ||||| || ||| || |||| Sbjct 10426016 GCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTTCGCTTTC 10425957 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| |||||| || || || || | |||||||| || || Sbjct 10425956 ACGTTCTCAATTGTGTCGCTGGGTTCAACCTCCAGGGTGATGGTCTTGCCCGTGAGCGTC 10425897 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 10425896 TTCACAAAGATCTGCAT 10425880 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| | ||||| || || || || Sbjct 10426304 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGTTGCTTGCCA 10426245 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | ||| || || || || | || ||||| || ||| || |||| Sbjct 10426244 GCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTTCGCTTTC 10426185 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| |||||| || || || || | |||||||| || || Sbjct 10426184 ACGTTCTCAATTGTGTCGCTGGGTTCAACCTCCAGGGTGATGGTCTTGCCCGTGAGCGTC 10426125 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 10426124 TTCACAAAGATCTGCAT 10426108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424909442938728