Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3989 91.5 2e-13 seq3898 86.0 8e-12 seq4702 84.2 3e-11 >seq3989 Length=9007450 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 130049 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 130108 ||||| ||||| ||||| ||||| ||||| || |||| ||| |||||||||||||| Sbjct 3293043 ATGAGCTCATTGGAGAATGTGAGACCAGGCATCAGGCCCCTCTTTTTCAACCAGAAAATT 3293102 Query 130109 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||| ||||||||||| || || ||||| Sbjct 3293103 GCAGCAAATGACCCAGAGAAGAAAATTCCTTCCAC 3293137 >seq3898 Length=2399012 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| ||||||| | |||| || || |||| ||| |||||||||||| Sbjct 244330 TAGATGTTGCTGGTGTAGGGCTCAATGGACTCGTTATTGCCCAGGATCTGGGCTGTGGAG 244271 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 || |||||||| || || | || |||||||| || Sbjct 244270 GCCGTGGGCATAGGAGCAAGCAGCAGGCTGTTGCG 244236 >seq4702 Length=3596321 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||| || | | ||| |||||||| ||| | || |||||||||||||||| ||||| Sbjct 2019927 CCTCATCTCTGCTGATCAGTTCATTGGAGTATGTGAGCCCTGGCATGAGACCCCTCTTCT 2019986 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||| | || || ||| || ||||| |||||||| |||||||| Sbjct 2019987 TCAGCCAGTAGATTGCCGCAAAGGACCCAGAAAAGAAGATTCCCTCCAC 2020035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618397947009640