Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq4310 122 1e-22 seq4425 93.3 6e-14 >seq4310 Length=11279338 Score = 122 bits (134), Expect = 1e-22 Identities = 255/370 (69%), Gaps = 24/370 (6%) Strand=Plus/Plus Query 13670 GCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAA 13729 ||||||||| | ||||||| ||||| ||| | |||| | ||| ||| | |||||| Sbjct 8869599 GCCCCTGAGTCAGGAAGAGAGAGAGTTCCCCCTGGCCTTC---ATCATGACCATCCACAA 8869655 Query 13730 ---GATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTG 13786 | | |||| |||| ||||||||| || || ||||||||||| |||||| ||||||| Sbjct 8869656 AGAGTTGGAGACGTTCATGCGCCTCCTCAGAGCAATCTACGCCCCCCAGAACATCTACTG 8869715 Query 13787 CGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTC--TCGGCCA--TCG 13842 | |||| ||||| ||||||| | | ||| || | | || || || |||| | | Sbjct 8869716 CATCCATGTGGATGCCAAGTC---CCAGGAG-TCTTACAAAGCTTCTGTCCGCCACCTGG 8869771 Query 13843 CCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTG---TACGGCT 13899 || |||||||| || ||| ||| | ||| | | | ||| || ||| ||||| Sbjct 8869772 TGAGCTGCTTCCCCAATGTGTTCCT-GTCCAGTGTCAG--CGAGGTTGTGACCTACGGGG 8869828 Query 13900 CCTGGAGTCGCG--TGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGT 13957 || ||||| | |||| ||| | | ||||||| |||||||| | | | | || Sbjct 8869829 GCT--TCTCGCGACTCAAGGCAGACATTAACTGCATGAAGGACCTGGTCTCATTGCGGGT 8869886 Query 13958 CAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGA 14017 |||||| | |||| |||||||| ||||||||| |||||| |||||||| Sbjct 8869887 GCCTTGGAGGAGAGTCATCAATCTGTGCGGTCAGGACTTCCCCGTCAAGAGTAACCTGGA 8869946 Query 14018 GATCGTGCGG 14027 | | |||||| Sbjct 8869947 GCTGGTGCGG 8869956 >seq4425 Length=11942861 Score = 93.3 bits (102), Expect = 6e-14 Identities = 229/342 (67%), Gaps = 14/342 (4%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || |||||| | || ||||| || ||||| |||||||||||| | | ||||| | || Sbjct 3024782 GAATTTCCCCTTGCATACTCCATAGTGATTCACCACAAGATCCAAAATTTCGAAAGACTG 3024841 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 || |||||||| || || || ||||| | |||||| ||||||||||| ||| |||| Sbjct 3024842 CTTAGGGCCATTTATGCACCTCAGAATTTTTACTGCATCCACGTGGACAACAAATCCG-- 3024899 Query 13812 GACGAGTTCATCC--GGGGC-GTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTG 13868 || | || ||| | ||| || | | || | | |||||| ||||| | | Sbjct 3024900 CACCA-TTATTCCAGGCGGCTGTAGCTGGAATTGTCTCCTGCTTCGACAACGTTGTGATT 3024958 Query 13869 GCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGC 13928 || | ||| | | || ||||| | | |||||| | || || || ||| ||| | Sbjct 3024959 TCCAGCAAACTGGAGAATGTAGTGTATGCCAGCTGGAGCAGGGTCCAAGCTGACATCAAC 3025018 Query 13929 TGCATGTCGGACCTGGACGCC----TCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTG 13984 |||||| ||||| | | ||| ||| |||| |||| | ||||||| || Sbjct 3025019 TGCATGAGAGACCTCTATAACATGAGCCCTCGT----TGGAAGTACTTCATCAACCTCTG 3025074 Query 13985 CGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCG 14026 ||| ||||| || | || ||||||||||| || ||||| Sbjct 3025075 CGGCCAAGACTTTCCAATAAAAACCAACCTGGAAATAGTGCG 3025116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658699519197440