Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4343 149 5e-31 >seq4343 Length=2653754 Score = 149 bits (164), Expect = 5e-31 Identities = 132/165 (80%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 ||||| | | ||| || |||||||| ||||| || | ||||||||||||||| |||||| Sbjct 516818 AGCCCTGCAATGTGGGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGT 516877 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || ||||| |||||||| |||||| |||||| ||||| || || ||||| || ||||| Sbjct 516878 ACGCCGAGGCCCATGTCTGCCGACCGCTGGTACAGCTGGCAGGACAGCTCCCCGTCGCTC 516937 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGG 27372 ||||| ||||| || | |||||||| || || | |||||| ||| Sbjct 516938 ACGTAGAACTGGCACAGAGCGTGGCAGGGGGGCAAAGCCATCAGG 516982 Score = 127 bits (140), Expect = 2e-24 Identities = 137/180 (76%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||| |||||||| || || | ||| ||||| ||||| || || |||||||| Sbjct 518034 CATGTCTTTGTATTCTGCTCCAAAGTGGCGCCACTGGAAACCGTAGACAGGCCCCAGGTC 518093 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||||| || ||| | ||| || ||||||||| || || | || || ||||| || Sbjct 518094 ACCCTCCTCTCTGGACGTGAACCCATTCTTGTCCAGGAATTCACGAGACCCATTGGCATC 518153 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668 ||||||||| || |||||||| || ||||| |||| || ||||| || ||| |||| || Sbjct 518154 CCAGATCTTGACGCCCTTCTCAGAAAGCTCCTTGGCATTGGTGGAGCC-CTGCCGAAGCA 518212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369485498264789