Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1986 122 1e-22 >seq1986 Length=125470 Score = 122 bits (134), Expect = 1e-22 Identities = 185/257 (72%), Gaps = 10/257 (4%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| ||||||||| | ||| || || ||||| || | || Sbjct 124482 GAACTTCTCGAAGTTCCAGGACACGTCGTTCCTGCAGACCGGGCTCCAGGTGATTAACTT 124541 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT--AGG 83260 |||||| ||| ||| | | ||||||||| || |||| || |||| | ||| Sbjct 124542 GGGGTCAGTCATGAGGGCGGATGGGTCGTCGCTGGGGAATGGCA--GCTTCTCCTTCAGG 124599 Query 83261 AAGGCGAAGAGCGGAT--GTGCCCTTGCACCGTTGACCTCGCAC-TTCTCGAAGAGCATA 83317 || | || || |||| || |||| ||||| ||||| ||| ||||| | ||| | Sbjct 124600 AACACAAACAGGGGATGGGTATCCTT--CCCGTTCACCTC-CACTTTCTCCAGCAGCTGA 124656 Query 83318 AAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCA 83377 || || ||||| ||||||| |||||||||| || |||||||||| | ||| || || Sbjct 124657 AACTTTGGCTCATAGCCGTTTCCAGGACGGATGTACTTCAGGGAAATGAGGATTTCCTCA 124716 Query 83378 TTCTGGGCGTTTTCCTG 83394 |||| | ||| ||||| Sbjct 124717 TTCTTGCAGTTCTCCTG 124733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608716979129560