Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3303 95.1 3e-14 >seq3303 Length=47767 Score = 95.1 bits (104), Expect = 3e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 ||||||||||| |||| ||||||||||| | || || |||||||| | || ||| Sbjct 42322 TTCGCCATGTACCTGGAGCCCTGGCACGCCGACGTGTTTGACTTCCTGGAGCTAAAGAAG 42263 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 |||| ||| || ||| |||||| | ||||| ||||||||||||||| | ||||| Sbjct 42262 AACACCGGAAAGGAGGAGCAGAGAGCCAGGGACCTTTTCTACGGCCTGTGGATYCCCGAC 42203 Query 249397 TTGTTCATG 249405 |||||||| Sbjct 42202 CTGTTCATG 42194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073622096197952