Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq134 87.8 2e-12 seq4351 82.4 8e-11 >seq134 Length=769775 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || |||| || || | |||||||||| |||||||||||||| |||| || |||||||||| Sbjct 260770 TTACTCCCCGTCAGGGAATCGAACCCCGGTCTCCCGCGTGAAAGGC-GAAATACTCACCA 260828 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 260829 CTATACTAACGAGGA 260843 >seq4351 Length=11629 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||||||| |||| || | | |||||||||| ||||| |||||||||||||||| ||| Sbjct 10939 GAAAAATA--CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATA 10996 Query 57057 CTCACCACTATACTACCGAGGA 57078 || ||||||||||| |||||| Sbjct 10997 CTGTCCACTATACTAACGAGGA 11018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543141578011760