Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1897 95.1 1e-14 seq4546 87.8 2e-12 >seq1897 Length=119533 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/127 (78%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333 |||| ||||| || || ||||||||||||||||||||||| || || |||| ||| || Sbjct 740 GCTC-ACCAGGTTCTCRTTGACGATGCCGTCGCTGGCGGCAAAGAACGCCAACACATGAG 798 Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCA-AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 |||||| | ||||| ||| |||| || | ||||||| || |||||||||||| Sbjct 799 AGATGAAGAACCTCTCGTCGTCCTTCAGAGAG-TCCCAGTGCTGCAGGTCCTTGGACAGA 857 Query 133393 TCCACCT 133399 ||||||| Sbjct 858 TCCACCT 864 >seq4546 Length=26461 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| |||| ||| || |||||| | | || | ||| ||||| || || | || | Sbjct 23433 CCTCATCCCGACTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAGTCCTCTCTTCT 23492 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 |||||||||| ||||| ||||| ||| || ||||||| |||||| || ||||| |||| Sbjct 23493 TGAGCCAAAAGATGGCAGCGAATGAGCCGGAGAAGAAGATGCCCTCCACTGCCGCAAAAG 23552 Query 133037 CCACCAGGCGCTCGCC 133052 |||| | ||||| || Sbjct 23553 CCACAATTCGCTCCCC 23568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500107221093760