Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1105 107 2e-18 >seq1105 Length=216922 Score = 107 bits (118), Expect = 2e-18 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 114290 TCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAG 114349 |||||||||||||| | ||| | ||||| |||||||||| ||||| || |||||||| Sbjct 17925 TCCCTGCTGAGGACAATGTTGATCCTGTTGTTCAGAGGTCTGTTCTTCTCTGGGATGGAA 17984 Query 114350 AACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||| || ||||| ||||| ||||||||||||| ||| ||| Sbjct 17985 AACCATGTTTTTCTGCCCATGATCACCACGTTCTTCTTGCCT 18026 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 114042 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAATGTCGCACGCAA 114101 |||||||||||||||||||| | ||| |||| | || ||||| || |||||||| ||| Sbjct 13436 ACTCTGGCAGTAGACGATATTTGTCTGGACTGATTTCAGGGAGGAACGTGTCGCACTCAA 13495 Query 114102 ATTGCGTC--GACACGTGAGTGACAAACAGCCTCTTTGTCCCCGGGCTCTCCATGAGCTC 114159 | ||| || || ||| ||||| ||||| ||| | |||||| |||||||||| | ||| Sbjct 13496 ACTGCTTCAGGATTCGT--GTGACGAACAGTCTCCTGGTCCCCAGGCTCTCCATCAACTC 13553 Query 114160 C 114160 | Sbjct 13554 C 13554 Score = 89.7 bits (98), Expect = 4e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 114443 AGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACGCT 114502 ||||| ||||| ||| ||||| | ||| || ||||||||||||| ||| |||||| | Sbjct 21959 AGTCTAACCGGCGTCCAGGGCAGGTTTCCATTATTCCCGATGCCCAGGTCCGGACACACC 22018 Query 114503 GCCACGATACCGTTCAGAATGAGGGGCATGGT 114534 ||||||||| ||||||||||| ||| ||| || Sbjct 22019 GCCACGATAGCGTTCAGAATGCGGGACATCGT 22050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406111278254254