Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq137484 158 1e-33 >seq137484 Length=8150 Score = 158 bits (174), Expect = 1e-33 Identities = 141/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 ||| || |||| ||| |||| ||||||||| || || | |||||||| || ||||| || Sbjct 3806 GAGTCCTGTGATGTGTGCGATCATGTAGGTGAGAAGTGCATAGCTGGCGATATTGAAAGG 3865 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGC 145868 |||||| || ||||| || || ||||||||||| ||||| || || ||||| ||| | Sbjct 3866 CACCCCGAGACCCATATCACCAGAGCGCTGGTAGAGCTGACACGACAGCTCGCCGTCGCA 3925 Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 ||||||||| || |||||| ||||||||| ||||| |||||| ||||||||| || Sbjct 3926 CACGTAGAATTGACACAGGGTGTGGCAGGGTGGCAGAGCCATGAGGGGCAGGTCTGC 3982 Score = 109 bits (120), Expect = 6e-19 Identities = 124/164 (76%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| ||||||| ||||||||||||||||| || || ||||| |||||||| || ||| Sbjct 5638 GTACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTCGCCTTCCTC 5697 Query 146100 CC----TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 | |||| ||||| | | | ||||||| ||||||||| ||||||||||| | Sbjct 5698 TCGATCTGTGA---AGCCCAGGTTGTCC-AGGAAGTTCCGGGACCCATTGGCGTCCCAAA 5753 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 |||| || || |||| |||||||| |||| || || || ||| Sbjct 5754 TCTTCACCCCTTTCGCTGAGAGCTCCTTGGCGTTTGTTGATCCC 5797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588849086209920