Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq64261 122 1e-22 >seq64261 Length=2568 Score = 122 bits (134), Expect = 1e-22 Identities = 185/257 (72%), Gaps = 10/257 (4%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| ||||||||| | ||| || || ||||| || | || Sbjct 2014 GAACTTCTCGAAGTTCCAGGACACGTCGTTCCTGCAGACCGGGCTCCAGGTGATTAACTT 1955 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT--AGG 83260 |||||| ||| ||| | | ||||||||| || ||||| | |||| | ||| Sbjct 1954 GGGGTCAGTCATGAGGGCGGATGGGTCGTCGCTGGGGAATGGCAG--CTTCTCCTTCAGG 1897 Query 83261 AAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTT-CTCGAAGAGCATA 83317 || | || || ||||| | |||| | |||| ||||| ||||| ||| | ||| | Sbjct 1896 AACACAAACAGGGGATGGGTATCCTTCC--CGTTCACCTC-CACTTTCTCCAGCAGCTGA 1840 Query 83318 AAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCA 83377 || || ||||| ||||||| ||||||||||||| ||||||||| | ||| || || Sbjct 1839 AACTTTGGCTCATAGCCGTTTCCAGGACGGACGTACTTCAGGGATATGAGGATTTCCTCA 1780 Query 83378 TTCTGGGCGTTTTCCTG 83394 |||| | ||| ||||| Sbjct 1779 TTCTTGCAGTTCTCCTG 1763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607530137377920