Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq137484 82.4 5e-11 >seq137484 Length=8150 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| || |||||||| | || | || | |||||| || || || ||||||||||| Sbjct 3813 GTGATGTGTGCGATCATGTAGGTGAGAAGTGCATAGCTGGCGATATTGAAAGGCACCCCG 3872 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||||||| | || | || || | |||||| || |||| || || ||||| || Sbjct 3873 AGACCCATATCACCAGAGCGCTGGTAGAGCTGACACGACAGCTCGCCGTCGCACACGTAG 3932 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 || |||| || || ||||| |||| ||||| Sbjct 3933 AATTGACACAGGGTGTGGCAGGGTGGCAGAGCCAT 3967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346080519179360