Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq137484 86.0 5e-12 >seq137484 Length=8150 Score = 86.0 bits (94), Expect = 5e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT-TGCTAATAAT 20451 |||| | |||||| |||| || || || | || || ||||| ||||| ||| | Sbjct 3975 TGCCCCTCATGGCTCTGCCACCCTGCCACACCCTGTGTCAATTCTACGTGTGCGACGGC- 3917 Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || |||||||||| | || || || || | ||||||||| || || || ||||||||| Sbjct 3916 GAGCTGTCGTGTCAGCTCTACCAGCGCTCTGGTGATATGGGTCTCGGGGTGCCTTTCAAT 3857 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 || || || ||||| || || || || ||||| ||||| | |||| Sbjct 3856 ATCGCCAGCTATGCACTTCTCACCTACATGATCGCACACATCACAG 3811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398374221325360