Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq51664 484 9e-132 seq108610 93.3 6e-14 >seq51664 Length=13532 Score = 484 bits (536), Expect = 9e-132 Identities = 1282/1944 (66%), Gaps = 23/1944 (1%) Strand=Plus/Plus Query 65118 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 65177 ||||| ||||| || |||| | |||||| || | || | || ||||| || || Sbjct 10779 TTCTTCATCTCCTCGCTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 10838 Query 65178 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 65237 || | ||||| ||||| || | || || || ||||| || || ||||| || | ||| Sbjct 10839 ACGATCTGAAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 10898 Query 65238 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 65297 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 10899 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGC 10958 Query 65298 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG-AGGTTCCCAATTCCAA-A 65355 | || || || | |||| | ||| || || || || || |||| | |||| | Sbjct 10959 AGGCTGTTCCTCACGCCGTGGATGGCGATCTTCTCCTTCAGCAGCTTCC--AGTCCAGCA 11016 Query 65356 GATCCGACGG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT 65414 | || | || | | | | | || || || || ||| || || Sbjct 11017 GTTCGGTGGGCTTCTTCTCCCACATGTCGTACT-GCAGGATGCCCTTGCTGACGGGAGAG 11075 Query 65415 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 65474 ||| | || || ||||| || || || | || || || || |||||||| | || Sbjct 11076 CCTGCGTACGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCCTCCAGGGCG 11135 Query 65475 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAAT 65534 ||| || ||| |||||||| | |||| || || || || ||| || || Sbjct 11136 GCGTGGTAGATGACCTCGAAGATTTGAATATTCAGCAGCTGAGCCTCTTCGCTTTCGAAC 11195 Query 65535 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 65594 || ||| | ||| || || || || || || ||||| || ||||| || || || || Sbjct 11196 GGGTAACGCATGAGGATGAAGGCATCCGCCAAACCTTGGACGCCAATTCCAATCGGCCTG 11255 Query 65595 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 65654 || | ||| || || |||| ||||| || | ||||| || ||||| || || || || Sbjct 11256 TGGCGCTTGTTGGACTTTTCCGCTTCGGGCACTGGATAGTAGTTAATTTCGATGATCTTG 11315 Query 65655 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT---CGC 65711 || | ||| |||| ||||||||| |||| |||||| ||| ||||| ||| Sbjct 11316 TTCAAATTCTTGACGATTACTTTGGTCACAGATGCCAGTTTTTTAAAGTCAAAAGTCCGC 11375 Query 65712 TCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT-- 65769 || | || ||||||| | |||| || ||||||||||| || |||||||||| Sbjct 11376 TCCGGGGTGACGTACATGTTGAGCGCAATTGAGGCCAGATTACACACCGCTACCTCATCG 11435 Query 65770 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 65829 | || | || | || || || ||||| || || || |||||||||| || | || Sbjct 11436 TGGCTGGTG--TACTCGATGATTTCTGTGCACAGGTTGCTGGACTTGATGGTGCCCAGAT 11493 Query 65830 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 65889 | ||||| || ||||| |||| || || || || || || ||| |||| || ||||||| Sbjct 11494 TCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTGCCAGTTT 11553 Query 65890 CAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTAT 65948 | |||| || || |||| || | ||| | | || ||||||| | | ||| | Sbjct 11554 CTGTCTGGGACTCGATAACGGCGTGCCACAACTGCT-GAGCCTTCACCACGCGCTTGAAC 11612 Query 65949 CTCTTTTCTCTTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 66006 || || ||| |||| || || | ||||||||| || ||||| | || Sbjct 11613 TTCCC--CTGCTTCTCATAGGAGGTGTAGAGCTTTTCGAACTCCTCCCCCCAGCACTCGT 11670 Query 66007 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 66066 |||| || || || || | |||||||||| ||||| || ||| || ||||| | Sbjct 11671 CCAACCCTGGGCACTCGTTGGGACACATCAGAGACCAGTCCTCGTTGCTCTCCACTCTCT 11730 Query 66067 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAAATCTCTGGTTCTATGTTCCTCG 66125 |||| || || || || ||||| || | || ||| | || |||| ||| || ||||| Sbjct 11731 TCATGAACAGGTCGGGGATCCACAGGCCGTAGAAA-AGGTCCCTGGCTCTCTGCTCCTCC 11789 Query 66126 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAG 66185 ||||| || ||||| || || || ||||| | | | || ||||| || |||| | Sbjct 11790 TTTCCGGTGTTCTTCTTTAGCTCCAGGAAGTCAAACACGTCGGCGTGCCAGGGCTCCAGG 11849 Query 66186 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 66245 || ||||| | |||| || | ||||| || ||||| || | ||| | || ||||| Sbjct 11850 TACATGGCGAAGGCTCCTGGTCTCTTGTTGCCGCCCTGGTCGACGTAACGTGCCGTGTTG 11909 Query 66246 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 66305 || |||||||||| ||| || | || || ||||| | || ||||| |||| ||| ||| Sbjct 11910 TTGTAAACTCTCAGCATGGGGACGATCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAG 11969 Query 66306 CTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 66365 || || ||| | || || || | | ||| |||||||| || ||| |||| Sbjct 11970 CTCCCCGTTGTTCTGATGCAGCTTATCGCCACACCAATTCCCCCGGCTGATTTGGAGACC 12029 Query 66366 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 66425 | |||||| | || | ||| || || ||||| || || || || || ||||| || Sbjct 12030 AGGGCGCATTGCTTCAGCGTGTCGTAAATGCCTTCGATGCTGTCGTCTTTCATGGCGAGC 12089 Query 66426 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 66485 || || ||||| |||| || | | | ||||| || || || | || || || ||| Sbjct 12090 AGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCTGCGTTGAAGAGCGTGGGGGAGGCG 12149 Query 66486 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 66545 || || ||||| || || || || || |||||||||||||| |||| ||| || ||| Sbjct 12150 TGGGTGAACCACTTCTCTGACAGCAGGTTGTACGTCTCAATGGCTGCGTCGATGTCCATC 12209 Query 66546 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 66605 | || || || || || || | ||| | ||||||||| |||| || | | ||| | Sbjct 12210 TTGTGGATCCCGACGGCCACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCG 12269 Query 66606 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 66665 || || ||||||| |||||| |||| ||| || || || || ||||||| || || Sbjct 12270 TTGATCTTCAACAGGTAGGACCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAA 12329 Query 66666 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 66725 |||| ||| |||| || |||||||||| || || | | | ||| | || | Sbjct 12330 TCTCTGTCGAAAATGATGGCCGAGTTGAGGCGGTCTTTGTTCTCGAGAACGATGTCGAGC 12389 Query 66726 GTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 66784 || | ||| || || || || || || ||||| || |||| |||||| | | Sbjct 12390 GT-CTCCTTGGAGATCATGGGCGAGTGGCGGTCATTTAAGGGGTTGATGTAGTTGTACAG 12448 Query 66785 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 66844 ||||||||||| ||||| || | || || || |||||||| || ||||| ||||| || Sbjct 12449 GTCCTCCATCACGTCACTGAACACCTTCTTCGTCTCTTTGTGCAGGTTTGAGACGGCGAT 12508 Query 66845 TCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 66904 | || || | ||||| || || || || | || || |||||| | || || || Sbjct 12509 CCGTGCAGCGAGTATGGCGTAGTCGGGGTGCTTAGTTGTGAGAGTGGCGGTGATCTCAGC 12568 Query 66905 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||||| ||||| | || || || || || || | || | || ||||| |||||||| Sbjct 12569 AGCCAGCGTGTCGAGCTCCACGGTGGTGACGCCGCTGTACAAACCCTGGATCACCTTCAT 12628 Query 66965 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 67024 | || | ||||| | |||| ||| | || || || | || || || Sbjct 12629 GGTGATCTGGGCCGGATCCACGAAGTCAGAGTTCAGTCCGTAGCACAGCTTCTGGATGCG 12688 Query 67025 AGATGTGATTTTATCAAACATGAC 67048 | | |||||||| || |||||||| Sbjct 12689 ACAAGTGATTTTGTCGAACATGAC 12712 >seq108610 Length=4066 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| || || |||||||||||||| || || || || | || || | | Sbjct 457 CACTGAACACTTTCTTGGTCTCTTTGTGTAGATTAGACACAGCAATCCGTGCAGCCAGGA 516 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||| || || |||| || ||| |||||||| | || |||||||||||||||| Sbjct 517 GAGCATAGTCAGGGTGTTTGGTGGTAAGGGTGGCTGCGGTCTCTGCTGCCAGAGTGTCCA 576 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 || || || || || ||| | || | || ||||| |||||||| Sbjct 577 GCTCCACGGTGGTGACCCCACTGTACAGACCCTGGATCACCTTCAT 622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656803405672320