Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq51664 475 4e-129 seq108610 96.9 4e-15 >seq51664 Length=13532 Score = 475 bits (526), Expect = 4e-129 Identities = 1280/1944 (66%), Gaps = 23/1944 (1%) Strand=Plus/Plus Query 62129 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 62188 ||||| ||||| || |||| | |||||| || | || | || ||||| || || Sbjct 10779 TTCTTCATCTCCTCGCTCCACAGCCCTCTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTG 10838 Query 62189 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62248 || | ||||| ||||| || | || || || ||||| || || ||||| || | ||| Sbjct 10839 ACGATCTGAAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 10898 Query 62249 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 62308 | ||||| || || |||| || || || || || || || ||||| || |||| || Sbjct 10899 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGC 10958 Query 62309 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG-AGGTTCCCAATTCCAA-A 62366 | || || || | |||| | ||| || || || || || |||| | |||| | Sbjct 10959 AGGCTGTTCCTCACGCCGTGGATGGCGATCTTCTCCTTCAGCAGCTTCC--AGTCCAGCA 11016 Query 62367 GATCCGACGG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT 62425 | || | || | | | | | || || || || ||| || || Sbjct 11017 GTTCGGTGGGCTTCTTCTCCCACATGTCGTACT-GCAGGATGCCCTTGCTGACGGGAGAG 11075 Query 62426 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 62485 ||| | || || ||||| || || || | || || || || |||||||| | || Sbjct 11076 CCTGCGTACGTCTCGTAGGGGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCCTCCAGGGCG 11135 Query 62486 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAAT 62545 ||| || ||| |||||||| | |||| || || || || ||| || || Sbjct 11136 GCGTGGTAGATGACCTCGAAGATTTGAATATTCAGCAGCTGAGCCTCTTCGCTTTCGAAC 11195 Query 62546 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 62605 || ||| | ||| || || || || || || ||||| || ||||| || || || || Sbjct 11196 GGGTAACGCATGAGGATGAAGGCATCCGCCAAACCTTGGACGCCAATTCCAATCGGCCTG 11255 Query 62606 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62665 || | ||| || || |||| ||||| || | ||||| || ||||| || || || || Sbjct 11256 TGGCGCTTGTTGGACTTTTCCGCTTCGGGCACTGGATAGTAGTTAATTTCGATGATCTTG 11315 Query 62666 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCA 62725 || | ||| |||| ||||||||| |||| |||||| ||| ||||| || Sbjct 11316 TTCAAATTCTTGACGATTACTTTGGTCACAGATGCCAGTTTTTTAAAGTCAAAAGTCCGC 11375 Query 62726 TCTA---TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT-- 62780 || | || ||||||| | |||| || ||||||||||| || |||||||||| Sbjct 11376 TCCGGGGTGACGTACATGTTGAGCGCAATTGAGGCCAGATTACACACCGCTACCTCATCG 11435 Query 62781 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 62840 | || | || | || || || ||||| || || || |||||||||| || | || Sbjct 11436 TGGCTGGTG--TACTCGATGATTTCTGTGCACAGGTTGCTGGACTTGATGGTGCCCAGAT 11493 Query 62841 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 62900 | ||||| || ||||| |||| || || || || || || ||| |||| || ||||||| Sbjct 11494 TCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTATGGCGTGCCAGTTT 11553 Query 62901 CAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTAT 62959 | |||| || || |||| || | ||| | | || ||||||| | | ||| | Sbjct 11554 CTGTCTGGGACTCGATAACGGCGTGCCACAACTGCT-GAGCCTTCACCACGCGCTTGAAC 11612 Query 62960 CTCTTTTCTCTTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63017 || || ||| |||| || || | ||||||||| || ||||| | || Sbjct 11613 TTCCC--CTGCTTCTCATAGGAGGTGTAGAGCTTTTCGAACTCCTCCCCCCAGCACTCGT 11670 Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 ||| || || || || | |||||||||| ||||| || ||| || ||||| | Sbjct 11671 CCAACCCTGGGCACTCGTTGGGACACATCAGAGACCAGTCCTCGTTGCTCTCCACTCTCT 11730 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCG 63136 |||| || || || || ||||| || | || ||| || || |||| ||| || ||||| Sbjct 11731 TCATGAACAGGTCGGGGATCCACAGGCCGTAGAAA-AGGTCCCTGGCTCTCTGCTCCTCC 11789 Query 63137 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63196 ||||| || ||||| || || || ||||| | | | || | ||||| || |||| | Sbjct 11790 TTTCCGGTGTTCTTCTTTAGCTCCAGGAAGTCAAACACGTCGGCGTGCCAGGGCTCCAGG 11849 Query 63197 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63256 || ||||| | |||| || | ||||| || ||||| || | ||| | || ||||| Sbjct 11850 TACATGGCGAAGGCTCCTGGTCTCTTGTTGCCGCCCTGGTCGACGTAACGTGCCGTGTTG 11909 Query 63257 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAG 63316 || |||||||||| ||| || | || || ||||| | || ||||| || | ||| ||| Sbjct 11910 TTGTAAACTCTCAGCATGGGGACGATCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAG 11969 Query 63317 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 || || | | | || || || | | ||| |||||||| || ||| |||| Sbjct 11970 CTCCCCGTTGTTCTGATGCAGCTTATCGCCACACCAATTCCCCCGGCTGATTTGGAGACC 12029 Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 | |||||| | || | ||| || || ||||| || || || || || ||||| || Sbjct 12030 AGGGCGCATTGCTTCAGCGTGTCGTAAATGCCTTCGATGCTGTCGTCTTTCATGGCGAGC 12089 Query 63437 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496 || || ||||| |||| || | | | ||||| || || || | || || || ||| Sbjct 12090 AGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCTGCGTTGAAGAGCGTGGGGGAGGCG 12149 Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556 || || ||||| || || || || || |||||||||||||| |||| ||| || ||| Sbjct 12150 TGGGTGAACCACTTCTCTGACAGCAGGTTGTACGTCTCAATGGCTGCGTCGATGTCCATC 12209 Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616 | || || || || || || | ||| | ||||||||| |||| || | | ||| | Sbjct 12210 TTGTGGATCCCGACGGCCACTCTCATGAGCATGTGCTGCGGTCGCTCGGCCACTTTGCCG 12269 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || || ||||||| |||||| |||| ||| || || || || ||||||| || || Sbjct 12270 TTGATCTTCAACAGGTAGGACCGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTAGGAGAAA 12329 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 63736 |||| ||| |||| || |||||||||| || || | | | ||| | || | Sbjct 12330 TCTCTGTCGAAAATGATGGCCGAGTTGAGGCGGTCTTTGTTCTCGAGAACGATGTCGAGC 12389 Query 63737 GTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 63795 || | ||| || || || || | || ||||| || |||| |||||| | | Sbjct 12390 GT-CTCCTTGGAGATCATGGGCGAGTGGCGGTCATTTAAGGGGTTGATGTAGTTGTACAG 12448 Query 63796 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 63855 ||||||||||| ||||| || | || || || |||||||| || ||||| ||||| || Sbjct 12449 GTCCTCCATCACGTCACTGAACACCTTCTTCGTCTCTTTGTGCAGGTTTGAGACGGCGAT 12508 Query 63856 TCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 63915 | || || || ||||| || || || || | || || |||||| | || || || Sbjct 12509 CCGTGCAGCGAGTATGGCGTAGTCGGGGTGCTTAGTTGTGAGAGTGGCGGTGATCTCAGC 12568 Query 63916 TGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||||| ||||| | || || || || || || | || | || ||||| |||||||| Sbjct 12569 AGCCAGCGTGTCGAGCTCCACGGTGGTGACGCCGCTGTACAAACCCTGGATCACCTTCAT 12628 Query 63976 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 64035 | || | ||||| | |||| ||| | || || || | || || || Sbjct 12629 GGTGATCTGGGCCGGATCCACGAAGTCAGAGTTCAGTCCGTAGCACAGCTTCTGGATGCG 12688 Query 64036 AGATGTGATTTTATCAAACATGAC 64059 | | |||||||| || |||||||| Sbjct 12689 ACAAGTGATTTTGTCGAACATGAC 12712 >seq108610 Length=4066 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| || || |||||||||||||| || || || || | || || || | Sbjct 457 CACTGAACACTTTCTTGGTCTCTTTGTGTAGATTAGACACAGCAATCCGTGCAGCCAGGA 516 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 ||||| || || |||| || ||| |||||||| | || |||||||||||||||| Sbjct 517 GAGCATAGTCAGGGTGTTTGGTGGTAAGGGTGGCTGCGGTCTCTGCTGCCAGAGTGTCCA 576 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 || || || || || ||| | || | || ||||| |||||||| Sbjct 577 GCTCCACGGTGGTGACCCCACTGTACAGACCCTGGATCACCTTCAT 622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632313665260800