Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq115624 84.2 2e-11 >seq115624 Length=278 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/215 (68%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| ||| ||| || | || | |||| Sbjct 263 ACTGGAAAGACCATCACCCTGGAGGTGGAGCCCAGTGATTCCATTGAAAACGTCAAGGCT 204 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGAT------------CAACAACGTCTTATA 22350 ||||| || ||||| ||||| || || || ||| || || ||||| || Sbjct 203 AAAATCCAGGACAAAGAGGGCATCCCTCCAGATNNNNNNNNNNNNCAGCAGCGTCTGATC 144 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 ||||| || || ||| | || || ||||||| ||||||| |||||||| || |||||| Sbjct 143 TTTGCTGGAAAGCAGCTGGAAGACGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAA 84 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| | || | || ||||| || | ||||| Sbjct 83 TCCACCCTCCACCTGGTCTTGCGTCTGAGGGGAGG 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418876546075120