Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq60932 109 1e-18 seq48423 93.3 8e-14 seq47767 91.5 3e-13 seq13309 91.5 3e-13 seq65395 89.7 9e-13 seq105069 84.2 4e-11 >seq60932 Length=4876 Score = 109 bits (120), Expect = 1e-18 Identities = 96/117 (82%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || ||||||||||||||||| || ||||| || || ||| ||| |||||||| ||| Sbjct 4704 TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTC-GCT 4762 Query 68406 -GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| || |||| ||||||||| || || ||||||||||| ||||| |||||||| Sbjct 4763 GGGTTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4819 >seq48423 Length=831 Score = 93.3 bits (102), Expect = 8e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| || || ||||||||||| || || |||||||| || || || |||||| Sbjct 16 TGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTTGCTTTAACATTTTCAATGGTG 75 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | || || |||| ||||||||| || || || |||||||| ||||| |||||| Sbjct 76 TCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTCACGAAGATCTGC 135 Query 68460 ATTATG 68465 ||| || Sbjct 136 ATTTTG 141 >seq47767 Length=302 Score = 91.5 bits (100), Expect = 3e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 68343 TGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCT 68402 ||||| || || ||||||||||| || || ||||| ||||||||| || || | ||| Sbjct 302 TGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTTTCAATTGAGTCA 243 Query 68403 GCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || || |||| ||||||||| ||||| || |||||||| || || ||||||||| Sbjct 242 CTGGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACAAAGATCTGCATT 183 >seq13309 Length=2637 Score = 91.5 bits (100), Expect = 3e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || || || ||||| || ||||||||||||||||| || ||||| ||||| || || Sbjct 2637 AGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCA 2578 Query 68394 ATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || |||| || || || | ||||||||| || || ||||||||||| || || Sbjct 2577 ATAGTATC-GCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAA 2519 Query 68453 TATCTGCAT 68461 |||||||| Sbjct 2518 GATCTGCAT 2510 >seq65395 Length=286 Score = 89.7 bits (98), Expect = 9e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || || || || || ||||| || ||||||||||| ||||| || ||||| || || ||| Sbjct 122 AAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCTTTCACG 63 Query 68388 GCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTT 68446 ||| || ||||| |||| || || |||| ||||||||| || || ||||||||||| Sbjct 62 TTCTCAATAGTGTC-GCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTT 4 Query 68447 GAC 68449 || Sbjct 3 AAC 1 Score = 84.2 bits (92), Expect = 4e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || || || || || ||||| || ||||||||||| ||||| || ||||| ||||| ||| Sbjct 286 AAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACG 227 Query 68388 GCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 ||| |||||||| ||| | || || || | ||||||||| || || |||||| Sbjct 226 TTCTCAATGGTGTC-GCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGG 173 >seq105069 Length=573 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 10740 ACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGG 10799 |||||||| | |||||||||| ||| ||||||||||||||||||| | |||||| || Sbjct 23 ACCTCCTCTGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGG 82 Query 10800 TACCGGATGGGGAA 10813 ||| |||||||||| Sbjct 83 TACTGGATGGGGAA 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919704872434560