Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq51664 178 2e-39 seq120612 89.7 6e-13 seq158314 82.4 9e-11 >seq51664 Length=13532 Score = 178 bits (196), Expect = 2e-39 Identities = 832/1300 (64%), Gaps = 32/1300 (2%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | || | | |||| ||||| |||| ||| |||||||||||| Sbjct 10875 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 10934 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || |||| || |||||||| | | || | || ||| Sbjct 10935 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGGATGGCGATCTTCTCC 10994 Query 114062 TTGAGGGCGTCCCAGTC--GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119 || || | |||||| | |||| | | | || | || |||||| || |||| | Sbjct 10995 TTCAGCAGCTTCCAGTCCAGCAGTTCGG--TGGGCTTCTTCTCCCACATGTCGTACTGCA 11052 Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179 |||| || | | | | || || || | | |||||||| ||||| | | |||| Sbjct 11053 GGATGCCCTTGCTGACGGGAGAGCCTGCGTACGTCTCGTAGGGGCCGAGCTCGGCGGCCA 11112 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 114239 ||| |||||||||| ||||| ||||| || || ||| || || || ||||| Sbjct 11113 GCTCGCAGCTCGCCTCCAGGGCGGCGTGGTAGATGACCTCGAAGATTTGAATATTCAGCA 11172 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 114299 || ||||| ||| || |||| | || | || || ||||||| | ||||| Sbjct 11173 GCTGAGCCTCTTCGCTTTCGAACGGGTAACGCATGAGGATGAAGGCATCCGCCAAACCTT 11232 Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGAT 114359 |||| || | ||||| || | || | | | || |||||| || ||| |||| Sbjct 11233 GGACGCCAATTCCAATCGGCCTGTGGCGCTTGTTGGACTTTTCCGCTTCGGGCACTGGAT 11292 Query 114360 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA- 114418 | | || | ||||| | | | || | ||| ||| || || || || | ||| Sbjct 11293 AGTAGTTAATTTCGATGATCTTGTTCAAATTCTTGACGATTACTTTGGTCACAG-ATGCC 11351 Query 114419 AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGAC 114478 || |||| | |||||| | || ||| |||| ||| | || || ||||| Sbjct 11352 AGTTTTTTAAAGTCAAAAGTCCG---CTCCGGGGTGACGTACATGTTGAGCGCAATTGAG 11408 Query 114479 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 114538 |||||||||||||| | |||||| | |||||||| || ||||| || |||| Sbjct 11409 GCCAGATTACACACCGCTACCTCATCGTGGCTGGTGTACTCGATGATTTCTGTGCACAGG 11468 Query 114539 TT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 114596 || || | ||| |||||||||| |||| ||| || ||| |||| || || || | Sbjct 11469 TTGCTGGA--CTTGATGGTGCCCAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTT 11526 Query 114597 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-GACA 114655 |||| |||||||||||||| || || || || ||||||| || || || | ||| || Sbjct 11527 TGTACAGCATGTATGGCGTGCCAGTTTCTGTCTGGGACTCGATAACGGCGTGCCACAACT 11586 Query 114656 TCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCT 114715 | | | || ||| | ||| ||||| || ||| || |||||||| | Sbjct 11587 GCTGAGCCT-TCACCACGCGCTTGAACTTCCCCTGCTTCTCATAGGAGGTGTAGAGCTTT 11645 Query 114716 TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGAC 114775 || ||||| || ||| | ||| | |||||| || | || || | |||||| Sbjct 11646 TCGAACTCCTCCCCCCAGCACTCGTCCAACCCTGGGCACTCGTTGGGACACATCAGAGAC 11705 Query 114776 CATTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGA 114833 || | || | | ||| || | ||||||||| ||||| |||||||| || | ||| Sbjct 11706 CA--GTCCTCGTTGCTCTCCACTCTCTTCATGAACAGGTCGGGGATCCACAGGCCGTAGA 11763 Query 114834 AGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 114892 | || |||| | | ||| || | | || || || | ||||| ||||| Sbjct 11764 AAAGGTCCCTGGCTCTCTGCTCCTCCTTTCCGGTG-TTCTTCTTTAGCTCCAGGAAGTCA 11822 Query 114893 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACC 114948 | | || |||||||| || |||||||||| |||| | || || | | || Sbjct 11823 AACACGTCGGCGTGCCAGGGCTCCAGGTACATGGCGAAGGCTCCTGGTCTCTTGTTG-CC 11881 Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008 |||||| || || | || ||| || | || | ||||| || | ||| || | Sbjct 11882 GCCCTGGTCGACGTAACGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGATCCCGTT 11941 Query 115009 AGATTGGCCATTTGT-CCCCCGAATACGAGACTTATTGGCTCTGA--CATCATGGATGTG 115065 || | ||| || || || ||| | | || | ||||| || | | || Sbjct 11942 GGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCCGTT-GTTCTGATGCAGCTT--ATCGC 11998 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 || |||||| ||||| || | || |||| | ||||| | | | || || |||| || Sbjct 11999 CACACCAATTCCCCCGGCTGATTTGGAGACCAGGGCGCATTGCTTCAGCGTGTCGTAAAT 12058 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 || ||||| ||| | || | |||| ||||||||||| |||| |||||||| Sbjct 12059 GCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTT 12118 Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 || || ||||||||||| || || | |||||| ||||| Sbjct 12119 GGTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAAC 12158 >seq120612 Length=9325 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||||| | |||| ||||| |||| ||| || |||||||| Sbjct 3638 TAGATGTTGCTGGTGTAAGCCTCAATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAA 3579 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 |||||||||||||| |||| ||| || ||||| Sbjct 3578 GCTGTGGGCATGGGGGCCAAGAGCAGACTGTT 3547 Score = 82.4 bits (90), Expect = 9e-11 Identities = 114/158 (72%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT--TGAACTCTTAATGGTG 114556 |||||| ||| |||||||||| || ||||| |||| ||| || | | | |||||| Sbjct 2719 CTCATCTTTACTTGTGTACTCTACGATCTCCGTGCACAGATTGCTGGATT--TGATGGTG 2662 Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616 |||| |||| || || ||| |||| || || |||||||| |||||||||||||| Sbjct 2661 CCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGCGTG 2602 Query 114617 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 114654 || || || || || || | || || || | ||| || Sbjct 2601 CCGGTTTCGGTCTGCGATTCGATGATGGCGTACCACAC 2564 >seq158314 Length=2971 Score = 82.4 bits (90), Expect = 9e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | ||| || || || |||||| ||| || ||||| || || | ||||| Sbjct 1945 CCTCGTCTCTGCTGATTAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCCTCTCTTCT 1886 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| |||||| || | || ||||| |||||||||||||||||||| ||||| | Sbjct 1885 TCAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 1826 Query 126186 CAAAGAGACGCTC 126198 | | | |||||| Sbjct 1825 CCACCACACGCTC 1813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596110746099840