Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq51664 161 9e-35 seq120612 95.1 1e-14 >seq51664 Length=13532 Score = 161 bits (178), Expect = 9e-35 Identities = 870/1377 (63%), Gaps = 20/1377 (1%) Strand=Plus/Minus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACG-GACG 122956 || || ||||| || || || ||||||||| | || || | || | ||| || | Sbjct 12265 AAAGTGGCCGAGCGACCGCAGCACATGCTCATGAGAGTGGCCGTCGGGATCCACAAGATG 12206 Query 122957 CGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGC 123016 |||||||| || | || || ||| | || |||| | || | ||||| ||||| Sbjct 12205 -GACATCGACGCAGCCATTGAGACGTACAACCTGCTGTCAGAGAAGTGGTTCACCCACGC 12147 Query 123017 GAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCT 123076 ||||| | ||| ||| || || || ||| ||| |||| || || |||| Sbjct 12146 CTCCCCCACGCTCTTCAACGCAGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCT 12087 Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGAT 123136 | || || || ||||||||| || || || || || || | ||||| || | Sbjct 12086 CGCCATGAAAGACGACAGCATCGAAGGCATTTACGACACGCTGAAGCAATGCGCCCTGGT 12027 Query 123137 TTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG 123196 ||||||| | ||| || || || ||| | | | | ||| || ||| Sbjct 12026 CTCCAAATCAGCCGGGGGAATTGGTGTGGCGATAAGCTGCATCAGAACAACGGGGAGCTA 11967 Query 123197 CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAA 123256 |||| ||||| |||| | | || |||| ||| |||||||| |||||||||| || Sbjct 11966 CATCGCCGGCACCAACGGCAACTCCAACGGGATCGTCCCCATGCTGAGAGTTTACAACAA 11907 Query 123257 CGCCGTGCGGCACGTCGACCAGGGCGGCAA-ACGCAA--AGGCGCGATGGCGATCTATCT 123313 | | | || ||||||||||||||||||| | | | ||| || | || || || || Sbjct 11906 CACGGCACGTTACGTCGACCAGGGCGGCAACAAGAGACCAGGAGCCTTCGCCATGTACCT 11847 Query 123314 AGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGA 123373 || || ||||||| || |||| || || | | |||| |||| || ||| Sbjct 11846 GGAGCCCTGGCACGCCGACGTGTTTGACTTCCTGGAGCTAAAGAAGAACACCGGAAAGGA 11787 Query 123374 AGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACG 123433 || ||| |||| | || | || |||| | ||| | ||||| |||| ||| | Sbjct 11786 GGAGCAGAGAGCCAGGGACCTTTTCTACGGCCTGTGGATCCCCGACCTGTTCATGAAGAG 11727 Query 123434 CGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGA 123493 || | | ||| | ||||| || ||||||||| | ||| || || ||| ||| Sbjct 11726 AGTGGAGAGCAACGAGGACTGGTCTCTGATGTGTCCCAACGAGTGCCCAGGGTTGGACGA 11667 Query 123494 CGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAA--CAG 123551 | || | |||| || || | ||| | || ||| | || || || Sbjct 11666 GTGCTGGGGGGAGGAGTTCGAAAAGCTCTACACCTCCTATGAGAAGCAGGGGAAGTTCAA 11607 Query 123552 GTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACC 123611 | || ||| ||| | | |||| | ||||||| | || ||||| Sbjct 11606 GCGCGT--GGTGAAGGCTCAGCAGTTGTGGCACGCCGTTATCGAGTCCCAGACAGAAACT 11549 Query 123612 GGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTG 123671 || ||||| |||||||| ||||||||||||||||||||||| | ||| || || || Sbjct 11548 GGCACGCCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTG 11489 Query 123672 GGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAA 123731 || || || || | || || || ||| | ||||| ||||| |||| | |||| | Sbjct 11488 GGCACCATCAAGTCCAGCAACCTGTGCACAGAAATCATCGAGTACACCAGCCACGATGAG 11429 Query 123732 GTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGAATCGTTGCGTCGAAAACGGCG---- 123786 || || ||||||||| |||| || | ||||| | || | |||| | ||| | Sbjct 11428 GTAGCGGTGTGTAATCTGGCCTC-AATTGCGCTCAACATGTACGTC-ACCCCGGAGCGGA 11371 Query 123787 CTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAA 123846 ||||| | || ||| || | | || ||| | || |||||||||||||| | Sbjct 11370 CTTTTGACTTTAAAAAACTGGCATCTGTGACCAAAGTAATCGTCAAGAATTTGAACAAGA 11311 Query 123847 TTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGAC 123906 | ||||| |||| | ||||| || |||||| ||| || | ||||| | Sbjct 11310 TCATCGAAATTAACTACTATCCAGTGCCCGAAGCGGAAAAGTCCAACAAGCGCCACAGGC 11251 Query 123907 CGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACG 123966 || | ||| | ||| | ||||| ||||| || || || | | |||| |||| || Sbjct 11250 CGATTGGAATTGGCGTCCAAGGTTTGGCGGATGCCTTCATCCTCATGCGTTACCCGTTCG 11191 Query 123967 AAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTT 124026 ||||||| || || || |||| |||| ||||| ||| || || ||| ||| Sbjct 11190 AAAGCGAAGAGGCTCAGCTGCTGAATATTCAAATCTTCGAGGTCATCTACCACGCCGCCC 11131 Query 124027 TGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCC 124086 |||||||||||||||| || || | |||| | ||||| | ||||| ||| | Sbjct 11130 TGGAGGCGAGCTGCGAGCTGGCCGCCGAGCTCGGCCCCTACGAGACGTACGCAGGCTCTC 11071 Query 124087 CGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGG 124146 | | ||| || || ||||||||||||||||| | | || || | || || Sbjct 11070 CCGTCAGCAAGGGCATCCTGCAGTACGACATGTGGGAGAAGAAGCCCACCGAACTGCTGG 11011 Query 124147 ACTGGAGCGTTTTAAAACAACGCATATCG--ACGCACGGTTTGCGTAACTCGCTGTTGGT 124204 |||||| | | || | | | |||| | ||||| || | ||| ||| || | Sbjct 11010 ACTGGAAGCTGCTGAAGGA--GAAGATCGCCATCCACGGCGTGAGGAACAGCCTGCTGCT 10953 Query 124205 GGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGA 124261 ||| ||||| ||||| |||| || || || | || |||||||| ||| |||| Sbjct 10952 GGCCCCGATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGA 10896 >seq120612 Length=9325 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || |||||| | || ||||||||| ||||| |||||||||||||| |||||||||||| Sbjct 2576 ATCATCGAATCGCAGACCGAAACCGGCACGCCATACATGCTCTACAAGGACGCCTGCAAC 2635 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 ||||| | ||| ||| || |||| || || |||| || ||||| ||| | || || Sbjct 2636 AGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAATCCAGCAATCTGTGCACGGAGATC 2695 Query 123708 ATCGAATACA 123717 | || |||| Sbjct 2696 GTAGAGTACA 2705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451062762142080