Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq51664 199 6e-46 seq120612 93.3 7e-14 >seq51664 Length=13532 Score = 199 bits (220), Expect = 6e-46 Identities = 516/771 (67%), Gaps = 24/771 (3%) Strand=Plus/Plus Query 204844 GGCCAGATTGCACACCGCGGG-TCTGTGTGGCTCGCTCACCTCCACGATCTCGGTGCACA 204902 ||||||||| |||||||| || |||||| | || || | ||| || ||||||| Sbjct 11408 GGCCAGATTACACACCGCTACCTCATCGTGGCTGGTGTAC-TCGATGATTTCTGTGCACA 11466 Query 204903 AGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCT 204962 ||| | | |||| | |||| || ||| ||||| ||| | ||| |||| ||| | Sbjct 11467 GGTTGCTGGACTTGATGGTGCCCAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGTCTT 11526 Query 204963 TGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TCGCAGAATGTGGGTCCACAAT 205021 |||||| |||| | ||| | || | || |||| || ||| | || | | |||||| Sbjct 11527 TGTACAGCATGTATGGCGTGCCAGTTTCTGTCTGGGACTCG-ATAACGGCGTGCCACAAC 11585 Query 205022 TCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAGACTCGTATTTTGTGTACAGC 205078 | |||||| |||| |||| | || |||| || ||| || ||||| ||| Sbjct 11586 TGCTGAGCCTTCACCACGCGCTTGA---ACTTCCCCTGCTTCTCATAGGAGGTGTAGAGC 11642 Query 205079 GCCACAAAGTCAGAACC---GTACACGTCCATCAGCCCTGGACATTTTTTGGGACACATC 205135 | || || || | || |||||| | ||||| || | |||||||||||| Sbjct 11643 TTTTCGAACTCCTCCCCCCAGCACTCGTCCAAC---CCTGGGCACTCGTTGGGACACATC 11699 Query 205136 AGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCG 205195 |||||||| || | | | ||| |||| ||| ||||||||| ||||||||||||| Sbjct 11700 AGAGACCAGTCCTCGTTGCTCTCCACTCTCTTCATGAACAGGTCGGGGATCCACAGGCCG 11759 Query 205196 TAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAA 205255 || || || || | ||| || | || | ||| |||||| || | ||||| || Sbjct 11760 TAGAAAAGGTCCCTGGCTCTCTGCTCCTCCTTTCCGGTGTTCTTCTTTAGCTCCAGG-AA 11818 Query 205256 GCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTT 205314 | | | | |||||||||||| ||||| | ||| ||| | || ||||| |||||||| Sbjct 11819 GTCAAACACGTCGGCGTGCCAGGGCTCCAGGTACATGGCGAAGGCTCCTGGTCTCTTGTT 11878 Query 205315 CCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACC 205374 || |||||||| || || | | | |||| |||||| |||||| || || | || Sbjct 11879 GCCGCCCTGGTCGACGTAACGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGATCCC 11938 Query 205375 GTTGGCGGTCCCGTTCGTGCTGTTGATG--GCCGAGCCTTCAGCCCTCACGTTGGAGATG 205432 ||||| | | ||||| |||| | |||| || | || | || | | | || Sbjct 11939 GTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCCGTT--GTTCTGATGCAGCTTATC 11996 Query 205433 GCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCTTGCAGAGTGCTGTAG 205492 ||| | ||||| || || | | |||| || | ||||||| | | ||| ||| ||| Sbjct 11997 GCCACACCAATTCCCCCGGCTGATTTGGAGACCAGGGCGCATTGCTTCAGCGTGTCGTAA 12056 Query 205493 ATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAAGCCAGCT-TGGCAAA 205551 |||||| ||||| ||||| || | | ||| |||| | ||||| |||| Sbjct 12057 ATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGC-CT 12115 Query 205552 GTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCGCTTCTC 205602 |||||| || |||| ||||||||||||| ||||||| |||| | |||||| Sbjct 12116 GTTGGTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAACCACTTCTC 12166 Score = 156 bits (172), Expect = 7e-33 Identities = 290/419 (69%), Gaps = 5/419 (1%) Strand=Plus/Plus Query 204100 CCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCA 204158 ||||| | || ||||||| || ||||| || || ||||||| | ||||| |||| Sbjct 10747 CCTGAATGGACCCGTTGTGAGCGATCAGCTGGTTCTTCATCTCCTCGCTCCACA-GCCCT 10805 Query 204159 ACCTGA-TCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACC 204217 || |||| || | ||| || ||||||| ||||||||| |||||||| || ||| Sbjct 10806 CTCTCCGTCAGGTCTTTGAGCAGATGAGGGTTGACGATCTGAAACTCTCCGGAGAGGACC 10865 Query 204218 CCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGA 204277 | |||||| | | |||| ||||| | | ||||| | |||||||||||| | ||||| Sbjct 10866 CTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGG 10925 Query 204278 GCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGG 204337 |||||| |||||||||||| || ||||| |||||| ||| | ||| |||| | | Sbjct 10926 GCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGGATGGCG 10985 Query 204338 ACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCG 204397 | | | |||||| ||||||| ||| | |||| ||| ||||||||||| Sbjct 10986 ATCTTCTCCTTCAGCAGCTTCCAGTCCAGCAGTTCGGTGGGCTTCTTCTCCCACATGTCG 11045 Query 204398 AACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATA-AGGCTGATCCTC 204456 |||| | |||||| | ||||| || ||| ||||||| || ||| || ||| Sbjct 11046 TACTGCAGGATGCCCTTGCTGACGGGAGAGCCTGCGTACGTCTCGTAGGGGCCGA-GCTC 11104 Query 204457 TTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAA 204515 | ||||||| ||| || ||| |||| | ||| ||| ||| ||||| |||| Sbjct 11105 GGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTGGTAGATGACCTCGAAGATTTGAA 11163 >seq120612 Length=9325 Score = 93.3 bits (102), Expect = 7e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248 || ||| |||||| || || || ||||||| |||||| | | |||| ||||| | | | Sbjct 3676 TGCTGACCTGAAACTCCCCAGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAAGCCT 3617 Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308 | | | |||||||||||| | ||||| |||||| || ||||||||||| |||| || Sbjct 3616 CAATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAAGCTGTGGGCATGGGGGCCAAGA 3557 Query 204309 GCAGGGAGTTGCGCACACC 204327 |||| ||| | |||||| Sbjct 3556 GCAGACTGTTCCTCACACC 3538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793500800090880