Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20]
166,448 sequences; 681,652,711 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq51664 203 4e-47
seq120612 111 2e-19
seq142310 82.4 9e-11
>seq51664
Length=13532
Score = 203 bits (224), Expect = 4e-47
Identities = 650/990 (66%), Gaps = 25/990 (3%)
Strand=Plus/Minus
Query 75703 CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG--AGGGTGGTCAATGGTCTCTT 75760
||||||||| || ||||| ||||||||| | || ||| | | || | ||||||||
Sbjct 11756 CCTGTGGATCCCCGACCTGTTCATGAAGAGAGTGGAGAGCAACGAGGAC--TGGTCTCTG 11699
Query 75761 TTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCCT 75819
| ||||| || || ||||| | ||| || | ||| |||||||| ||| ||
Sbjct 11698 ATGTGTCCCAACGAGTGCCCAGGGTTGGACGAGTGCTGGGGG-GAGGAGTTCGAAAAGCT 11640
Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-T 75878
|||||| ||||| || |||| | ||| ||| || || | | | ||| |
Sbjct 11639 CTACACCTCCTATGAGAAGCAGGGGAAGTTCAA-GCGCGTGGTGAAGGCTCAGCAGTTGT 11581
Query 75879 GGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATG 75938
|| | || || || | || ||||| || ||||| || ||||| ||||| ||||| || |
Sbjct 11580 GGCACGCCGTTATCGAGTCCCAGACAGAAACTGGCACGCCATACATGCTGTACAAAGACG 11521
Query 75939 CTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCA 75998
| || |||| |||||| |||||| ||||| |||| || |||||| | || || ||||
Sbjct 11520 CCTGCAACAGGAAGAGCAACCAACAGAATCTGGGCACCATCAAGTCCAGCAACCTGTGCA 11461
Query 75999 CGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCG 76058
| ||||| | |||||||| | |||||| || || || ||| |||| ||||| |
Sbjct 11460 CAGAAATCATCGAGTACACCAGCCACGATGAGGTAGCGGTGTGTAATCTGGCCTCAATTG 11401
Query 76059 CCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTT-CATGAA 76117
| || | ||| |||| ||| || |||||||| | | ||||||| |||
Sbjct 11400 CGCTCAACATGTACGTCACCCCGGAG---CGGACTTTTGACTTTAAAAAACTGGCATCTG 11344
Query 76118 ATCACAAAG--ATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCG 76175
||||| || || ||| ||| | ||| |||| || | || | ||||| |
Sbjct 11343 TGACCAAAGTAATCGT---CAAGAATTTGAACAAGATCATCGAAATTAACTACTATCCAG 11287
Query 76176 TTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTC 76235
| ||| |||||| || | ||| ||||| || ||||| | || || ||||||
Sbjct 11286 TGCCCGAAGCGGAAAAGTCCAACAAGCGCCACAGGCCGATTGGAATTGGCGTCCAAGGTT 11227
Query 76236 TCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGA 76295
| ||||||| || || | || ||| | || || || || || || | |||
Sbjct 11226 TGGCGGATGCCTTCATCCTCATGCGTTACCCGTTCGAAAGCGAAGAGGCTCAGCTGCTGA 11167
Query 76296 ATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTG 76355
|| || ||||| || ||| || ||||| ||||||||||||| || || |||| |
Sbjct 11166 ATATTCAAATCTTCGAGGTCATCTACCACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCCG 11107
Query 76356 AAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC-CAAGGGG-TGCTTCA 76413
| | || |||| ||||| | | || ||||||| || |||||| | || ||
Sbjct 11106 CCGAGCTCGGCCCCTACGAGACGTACGCAGGCTCTCCCG--TCAGCAAGGGCATCCTGCA 11049
Query 76414 GTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTAC--GACTGGGATGTTCTCAAGGAA 76471
|| || |||||||| | ||| || | | |||| | |||||| | | || |||||
Sbjct 11048 GTACGACATGTGGGA-GAAGAAGCCCACCG-AACTGCTGGACTGGAAGCTGCTGAAGGAG 10991
Query 76472 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 76531
||| | || | | ||||| || || |||| || ||||| || ||||||
Sbjct 10990 AAGATCGCCATCCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCC 10931
Query 76532 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTG 76591
||||| || ||| |||| || || || | | | ||| | ||||| | |||||||||
Sbjct 10930 ACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAAGCCTACACCAGCAACATCTACACC 10871
Query 76592 AGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAG 76651
| || |||| | || |||||| || |||||| || || |||| ||||| | |
Sbjct 10870 CGCAGGGTCCTCTCCGGAGAGTTTCAGATCGTCAACCCTCATCTGCTCAAAGACCTGACG 10811
Query 76652 AAGATTGGTCTCTGGTCCAAGGATATGAAG 76681
||| || || ||| | |||| ||||||
Sbjct 10810 GAGAGAGGGCTGTGGAGCGAGGAGATGAAG 10781
>seq120612
Length=9325
Score = 111 bits (122), Expect = 2e-19
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934
|| ||| | || || || |||| ||||| || || || || ||||| ||||| ||||||
Sbjct 2564 GTGTGGTACGCCATCATCGAATCGCAGACCGAAACCGGCACGCCATACATGCTCTACAAG 2623
Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994
|| || || |||| |||||| ||||| ||||| |||| || ||||| | |||||
Sbjct 2624 GACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAATCCAGCAATCTG 2683
Query 75995 TGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030
|||||||| || ||||||||||| ||| ||||||
Sbjct 2684 TGCACGGAGATCGTAGAGTACACAAGTAAAGATGAG 2719
>seq142310
Length=1461
Score = 82.4 bits (90), Expect = 9e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136
||||| || | || || ||| |||||||| |||||||||||||| |||||| ||
Sbjct 950 GAGCGAATTGTGGCTTTCGCGGCAGTGGAGGGCATCTTCTTCTCCGGCTCATTCGCTGCC 891
Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196
|| | |||| | |||||| | || || ||||| ||||| || ||| || || || |||
Sbjct 890 ATCTTTTGGCTCAAGAAGAGAGGACTAATGCCTGGCCTTACCTACTCCAACGAGCTGATT 831
Query 65197 TCCCGAGATGAGG 65209
||| |||||||
Sbjct 830 AGCCGGGATGAGG 818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595328377290240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |