Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq51664 185 1e-41 seq120612 86.0 8e-12 seq158314 82.4 9e-11 >seq51664 Length=13532 Score = 185 bits (204), Expect = 1e-41 Identities = 844/1308 (65%), Gaps = 48/1308 (4%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | || | | |||| ||||| |||| ||| ||||| |||||| Sbjct 10875 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 10934 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || |||| || |||||||| | | || | || ||| Sbjct 10935 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGGATGGCGATCTTCTCC 10994 Query 118302 TTGAG-AGCGTCCCAGTC--GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 118358 || || ||| ||| |||| | |||| | | | || | || |||||| || |||| Sbjct 10995 TTCAGCAGCTTCC-AGTCCAGCAGTTCGG--TGGGCTTCTTCTCCCACATGTCGTACTGC 11051 Query 118359 AGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 ||||| || | | |||| || || || | | ||||| || ||||| | | | Sbjct 11052 AGGATGCCCTTGCTGACG--GGAGAGCCTGCGTACGTCTCGTAGGGGCCGAGCTCGGCGG 11109 Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476 ||| ||| |||||||||| ||||| ||||| || || || || || || ||||| Sbjct 11110 CCAGCTCGCAGCTCGCCTCCAGGGCGGCGTGGTAGATGACCTCGAAGATTTGAATATTCA 11169 Query 118477 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGAC 118536 || ||||| ||| || |||| | || | || || ||||||| | || Sbjct 11170 GCAGCTGAGCCTCTTCGCTTTCGAACGGGTAACGCATGAGGATGAAGGCATCCGCCAAAC 11229 Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT--CCGAG-CGGTCTCCA 118593 ||||||| || | ||||| || | || | | | || ||||| ||| ||| | | Sbjct 11230 CTTGGACGCCAATTCCAATCGGCCTGTGGCGCTTGTTGGACTTTTCCGCTTCGGGC---A 11286 Query 118594 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 118653 | ||||| | || | ||||| | | | || | ||| ||| || || || || | Sbjct 11287 CTGGATAGTAGTTAATTTCGATGATCTTGTTCAAATTCTTGACGATTACTTTGGTCACAG 11346 Query 118654 CATGA-AGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712 ||| || |||| | |||||| | || ||| |||| ||| | || || Sbjct 11347 -ATGCCAGTTTTTTAAAGTCAAAAGTCCG---CTCCGGGGTGACGTACATGTTGAGCGCA 11402 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 ||||| |||||||||||||| | |||||| | |||||||| || ||||| ||| Sbjct 11403 ATTGAGGCCAGATTACACACCGCTACCTCATCGTGGCTGGTGTACTCGATGATTTCTGTG 11462 Query 118773 CACAAGTT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 118830 |||| ||| || | ||| |||||||||| |||| ||| || ||| |||| || | Sbjct 11463 CACAGGTTGCTGGA--CTTGATGGTGCCCAGATTCTGTTGGTTGCTCTTCCTGTTGCAGG 11520 Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 118890 | || ||||| |||||||||||||| || || || || ||||||| || || || | || Sbjct 11521 CGTCTTTGTACAGCATGTATGGCGTGCCAGTTTCTGTCTGGGACTCGATAACGGCGTGCC 11580 Query 118891 AGACATCGGC--AGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 ||| | || ||| ||| | ||| ||||| | ||| || ||||| Sbjct 11581 --ACAACTGCTGAGCCTTCACCACGCGCTTGAACTTCCCCTGCTTCTCATAGGAGGTGTA 11638 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 ||| ||| ||||| || ||| | ||| | |||||| || | || || | Sbjct 11639 GAGCTTTTCGAACTCCTCCCCCCAGCACTCGTCCAACCCTGGGCACTCGTTGGGACACAT 11698 Query 119009 GAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 |||||||| | || | | ||| || | ||||||||| ||||| |||||||| || Sbjct 11699 CAGAGACCA--GTCCTCGTTGCTCTCCACTCTCTTCATGAACAGGTCGGGGATCCACAG- 11755 Query 119067 GCCG-AGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 119124 |||| |||| || |||| | | ||| || | | || || || | ||||| Sbjct 11756 GCCGTAGAAAAGGTCCCTGGCTCTCTGCTCCTCCTTTCCGGTG-TTCTTCTTTAGCTCCA 11814 Query 119125 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTA 119180 ||||| | | || |||||||| || |||||||||| |||| | || || Sbjct 11815 GGAAGTCAAACACGTCGGCGTGCCAGGGCTCCAGGTACATGGCGAAGGCTCCTGGTCTCT 11874 Query 119181 CGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 | | || |||||| || || | || ||| ||| | || | ||||| || | | Sbjct 11875 TGTTG-CCGCCCTGGTCGACGTAACGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACG 11933 Query 119241 ATACCATCGGATTGGCCATTTGT-CCCCCGAATACGAGACTTATTGGCTCTGA--CATCG 119297 || || | ||| | ||| || || || ||| | | || | ||||| || | Sbjct 11934 ATCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCCGTT-GTTCTGATGCAGCT 11992 Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 | || || |||||| ||||| || | || |||| | ||||| | | | || || Sbjct 11993 T--ATCGCCACACCAATTCCCCCGGCTGATTTGGAGACCAGGGCGCATTGCTTCAGCGTG 12050 Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417 |||| || || ||||| ||| | || | |||| ||||||||||| |||| || Sbjct 12051 TCGTAAATGCCTTCGATGCTGTCGTCTTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGT 12110 Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAAC 119465 |||||| || || ||||||||||| || || | |||||| ||||| Sbjct 12111 GGCCTGTTGGTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAAC 12158 >seq120612 Length=9325 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | ||||| | |||| ||||| |||| ||| || || ||||| Sbjct 3638 TAGATGTTGCTGGTGTAAGCCTCAATGGACTCGTTGTTGCCCAGGATCTGTGCGGTGGAA 3579 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 |||||||||||||| |||| ||| || ||||| Sbjct 3578 GCTGTGGGCATGGGGGCCAAGAGCAGACTGTT 3547 Score = 82.4 bits (90), Expect = 9e-11 Identities = 114/158 (72%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT--TGAACTCTTAATGGTG 118796 |||||| ||| |||||||||| || |||||||||| || || | | | |||||| Sbjct 2719 CTCATCTTTACTTGTGTACTCTACGATCTCCGTGCACAGATTGCTGGATT--TGATGGTG 2662 Query 118797 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 118856 |||| |||| || || ||| |||| || || |||||||| |||||||||||||| Sbjct 2661 CCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGCGTG 2602 Query 118857 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 || || || || || || | || || || | ||| || Sbjct 2601 CCGGTTTCGGTCTGCGATTCGATGATGGCGTACCACAC 2564 >seq158314 Length=2971 Score = 82.4 bits (90), Expect = 9e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| | | ||| || || || |||||| |||||| ||||| || || | ||||| Sbjct 1945 CCTCGTCTCTGCTGATTAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGGCCTCTCTTCT 1886 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||||| || | || || |||||||||||||| |||||||| ||||| | Sbjct 1885 TCAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 1826 Query 130155 CAAAGAGACGCTC 130167 | | | |||||| Sbjct 1825 CCACCACACGCTC 1813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617148483722880