Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq51664 138 1e-27 seq158314 93.3 5e-14 >seq51664 Length=13532 Score = 138 bits (152), Expect = 1e-27 Identities = 644/1004 (64%), Gaps = 25/1004 (2%) Strand=Plus/Minus Query 104699 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 104758 || || |||| || || ||||| || || || |||||||||||||| ||| | | Sbjct 11770 GACCTTTTCTACGGCCTGTGGATCCCCGACCTGTTCATGAAGAGAGTGGAGAGCAACGAG 11711 Query 104759 AATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGA 104817 | |||||||| | ||||| || || || || | ||| ||| | ||| ||||| Sbjct 11710 GACTGGTCTCTGATGTGTCCCAACGAGTGCCCAGGGTTGGACGAGTGCTGGGGG-GAGGA 11652 Query 104818 GTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG--CGACTGCGACGGTGCCA 104875 ||| ||| || ||||| || ||| ||| ||| | | | ||| |||| Sbjct 11651 GTTCGAAAAGCTCTACACCTCCTATGAG-AAGCAGGGGAAGTTCAAGCGCGT-GGTGAAG 11594 Query 104876 GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATG 104935 ||| | ||||| | || || || |||| || || || ||||| || ||||||||| Sbjct 11593 GCTCAGCAGTTGTGGCACGCCGTTATCGAGTCCCAGACAGAAACTGGCACGCCATACATG 11534 Query 104936 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 104995 || |||||||||||||| ||| ||||| || ||| ||||| |||| |||||| Sbjct 11533 CTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAACAGAATCTGGGCACCATCAAGTCC 11474 Query 104996 TCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAAC 105055 ||| || || ||||||||| | || | || | | |||||| || |||||||| Sbjct 11473 AGCAACCTGTGCACAGAAATCATCGAGTACACCAGCCACGATGAGGTAGCGGTGTGTAAT 11414 Query 105056 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAA 105115 || || ||||| || ||| || ||| || || ||| ||| ||||| | | || Sbjct 11413 CTGGCCTCAATTGCGCTCAACATGTACGTCACCCCGGAG---CGGACTTTTGACTTTAAA 11357 Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 ||||| || || ||| || ||| || | |||| | || || | || Sbjct 11356 AAACTGGCATCTGTGACCAAAGTAATCGTCAAGAATTTGAACAAGATCATCGAAATTAAC 11297 Query 105176 TTTTACCCCGTTGAGACTG-CTCGTAAA--TCTAATATGAGACACCGTCCAATTGGTCTC 105232 | || || || | | | || ||| || || | | | ||| | || ||||| | Sbjct 11296 TACTATCCAGT---GCCCGAAGCGGAAAAGTCCAACAAGCGCCACAGGCCGATTGGAATT 11240 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAA 105292 || || || ||| | ||||||| ||||| || || || | || || ||| || Sbjct 11239 GGCGTCCAAGGTTTGGCGGATGCCTTCATCCTCATGCGTTACCCGTTCGAAAGCGAAGAG 11180 Query 105293 GCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGT 105352 || || | ||| | || || ||| ||| || |||||||| || |||||||| Sbjct 11179 GCTCAGCTGCTGAATATTCAAATCTTCGAGGTCATCTACCACGCCGCCCTGGAGGCGAGC 11120 Query 105353 TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CA 105411 | ||| |||| | | || || || || || | | || ||||| | ||| || Sbjct 11119 TGCGAGCTGGCCGCCGAGCTCGGCCCCTACGAGACGTACGCAGGCTCTCC--CGTCAGCA 11062 Query 105412 AGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC--GACTGGGA 105468 |||| | || || | || |||||||| || ||| | ||| | |||| ||| Sbjct 11061 AGGGCATCCTGCAGTACGACATGTGGGAGAAGAAGCCCA--CCGAACTGCTGGACT-GGA 11005 Query 105469 AGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 |||| || ||||| ||| | || | | ||||| || || |||| || | Sbjct 11004 AGCTGCTGAAGGAGAAGATCGCCATCCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGA 10945 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || ||||||||||| || ||| |||| || || || | | | ||| ||||||| | Sbjct 10944 TGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAAGCCTACACCA 10885 Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCG 105647 |||||||| | || |||| | ||||||||| ||| |||||| ||||| Sbjct 10884 GCAACATCTACACCCGCAGGGTCCTCTCCGGAGAGTTTCAGATCGTCAACCCTCATCTGC 10825 Query 105648 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691 | | ||||| | |||| || || ||| | |||| |||||| Sbjct 10824 TCAAAGACCTGACGGAGAGAGGGCTGTGGAGCGAGGAGATGAAG 10781 >seq158314 Length=2971 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||||||||||||| | | || | ||||| |||||| |||| Sbjct 1837 GTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCTGGCTGAAGAAGAGAGGC 1896 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 || ||||| ||||| ||||||||||||||| ||| | ||||||| Sbjct 1897 CTGATGCCCGGTCTGACCTTCTCCAACGAGCTAATCAGCAGAGACGAGG 1945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582047267579520