Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20]
166,448 sequences; 681,652,711 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq48423 109 1e-18
seq115624 107 4e-18
seq60932 102 2e-16
seq13309 100 7e-16
seq47767 91.5 3e-13
seq143157 89.7 1e-12
seq65395 86.0 1e-11
seq110159 84.2 5e-11
>seq48423
Length=831
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| || || || ||||| ||||| | |||||||| |||||||||||| |||
Sbjct 1 GCAAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTTGCTTTA 60
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| ||||| ||||||||| | || ||||| || ||||| ||||| || || || |||
Sbjct 61 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTC 120
Query 211098 TTTACAAACACCTGCATTTT 211117
|| || || | |||||||||
Sbjct 121 TTCACGAAGATCTGCATTTT 140
>seq115624
Length=278
Score = 107 bits (118), Expect = 4e-18
Identities = 150/213 (70%), Gaps = 12/213 (6%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| ||||| || ||||| ||||| |||||||| || || | ||||| | || |||||
Sbjct 66 GACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTC 125
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG------------TCAGGAGGAACTCC 211012
||||||||| || || ||||| || || || || || ||||| | ||
Sbjct 126 CAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGNNNNNNNNNNNNATCTGGAGGGATGCC 185
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|| ||||||||||| || || |||||||| |||| ||| | || ||||| ||
Sbjct 186 CTCTTTGTCCTGGATTTTAGCCTTGACGTTTTCAATGGAATCACTGGGCTCCACCTCCAG 245
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| |||||||| || || ||||| || ||
Sbjct 246 GGTGATGGTCTTTCCAGTCAGGGTCTTCACGAA 278
>seq60932
Length=4876
Score = 102 bits (112), Expect = 2e-16
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058
|| || |||| |||||||||||||||||||| ||||||||| || |||||||| |
Sbjct 4704 TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCGCTG 4763
Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||| || ||||| ||||| || ||||| ||||| || || | ||||||
Sbjct 4764 GGTTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4819
>seq13309
Length=2637
Score = 100 bits (110), Expect = 7e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052
|| ||||| || |||| |||||||||||||||||||| ||||| ||||| || ||
Sbjct 2631 TGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCAATAGTA 2572
Query 211053 TCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112
|| | ||||||||||| ||||| ||||| || ||||| ||||| ||||| | ||||
Sbjct 2571 TCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGC 2512
Query 211113 ATTTT 211117
|| ||
Sbjct 2511 ATGTT 2507
>seq47767
Length=302
Score = 91.5 bits (100), Expect = 3e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 210996 TGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCA 211055
||||| ||||| | |||||||| ||||||||||| || |||||||| || | ||||
Sbjct 302 TGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTTTCAATTGAGTCA 243
Query 211056 GAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
| || ||||| || ||||| |||||||| || || ||||| ||||| | |||||||
Sbjct 242 CTGGGCTCCACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACAAAGATCTGCATT 183
>seq143157
Length=3800
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/194 (71%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 139822 GGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAAC 139881
|| |||||||| || |||||||||||||||| | || ||| ||| ||||| ||||||
Sbjct 1818 GGCAGAGGAGGGCAGTCTGCTCTGCGTTTTGCTCGTCTGAGAATGGAGAAGAGACACAAC 1877
Query 139882 TACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTAT---CAAAGACAACAAGTGT 139938
||| ||||||| || || |||| || | ||| ||| | ||| |||| |||| |
Sbjct 1878 TACGTGAGAAAGGTGGCTGAGACGGCTGTCCAGCTCTTTGTGTCCAACGACA--AAGT-T 1934
Query 139939 TTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCT 139998
||| | || || || ||||| || || || || |||||||| ||||| | ||
Sbjct 1935 AATGTGGCAGGAATGGTCTTGGCTGGCTCTGCCGACTTCAAGACCGAGCTCAGCCAGTCG 1994
Query 139999 GACTTTTTTGACCC 140012
||| | || |||||
Sbjct 1995 GACATGTTCGACCC 2008
>seq65395
Length=286
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 210981 AAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACG 211040
||||| || | || ||||| || |||| ||||| |||||||||||||| |||||||
Sbjct 122 AAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCTTTCACG 63
Query 211041 TTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTT 211100
|| || || ||||| | || ||||| || ||||| ||||| || ||||| |||||
Sbjct 62 TTCTCAATAGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTA 3
Query 211101 AC 211102
||
Sbjct 2 AC 1
>seq110159
Length=1153
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||||||||| |||||||| || |||||||| | || ||||| ||||||
Sbjct 1153 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCGACCTCAAGAGTG 1094
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || ||||| ||||| ||||| | |||||| ||
Sbjct 1093 ATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGTT 1053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1156679975057520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |