Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq137484 152 4e-32 seq64622 93.3 3e-14 seq67862 86.0 5e-12 >seq137484 Length=8150 Score = 152 bits (168), Expect = 4e-32 Identities = 138/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || | ||||||||||| || || || Sbjct 3807 AGTCCTGTGATGTGTGCGATCATGTAGGTGAGAAGTGCATAGCTGGCGATATTGAAAGGC 3866 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 |||||||| ||||| || || || | |||||||||||||||||| ||||| || |||| Sbjct 3867 ACCCCGAGACCCATATCACCAGAGCGCTGGTAGAGCTGACACGACAGCTCGCCGTCGCAC 3926 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381 ||||| || ||||| | || |||||| || || |||||||||||| || |||| Sbjct 3927 ACGTAGAATTGACACAGGGTGTGGCAGGGTGGCAGAGCCATGAGGGGCAGGTCT 3980 Score = 132 bits (146), Expect = 4e-26 Identities = 135/175 (77%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||| |||||||| || || || |||||||| ||||| || ||||| ||||||||||| Sbjct 5629 CATGTTTGTGTACTCGGCCCCAAAGTGCCTCCACTGGAAACCATACACGGGTCCCAGGTC 5688 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || || || | | ||||||| ||||||| |||| | ||| || |||||||| Sbjct 5689 GCCTTCCTCTCGATCTGTGAAGCCCAGGTTGTCCAGGAAGTTCCGGGACCCATTGGCGTC 5748 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 27662 ||| ||||| ||||| ||| | |||||||| |||| |||||| || |||| |||| Sbjct 5749 CCAAATCTTCACCCCTTTCGCTGAGAGCTCCTTGGCGTTTGTTGATCCCTGTGAC 5803 >seq64622 Length=1521 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 69157 GTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACG 69216 ||||||||||||| ||||||||||| ||| || |||||||| | ||| || ||||| Sbjct 1277 GTGACCAGCTTGTTCTGATGACCTGTGAGTACAGAAAGGTGTATGCCTACGATGGAGAGA 1218 Query 69217 AGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTG 69276 |||||||| ||||| || | ||| ||| | | | |||||| ||||| | Sbjct 1217 AGCTGCATTTGGTGTCTTCAAGCCTGAGGCAGCTACATTACAAGGGAATAAAATATCCAG 1158 Query 69277 CATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACATATG 69317 || |||| ||||| | ||||||||||||||||| ||| Sbjct 1157 CACCGAAGAGATATTACAAAGGGGAGGCCTTCAAACACATG 1117 >seq67862 Length=730 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 69157 GTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACG 69216 |||||||||| || ||||||||||| |||||| ||| |||| | ||| || ||| | Sbjct 521 GTGACCAGCTCGTTCTGATGACCTGTGAGGACAGAAAGCTGTATGCCTACGATGGACAGA 462 Query 69217 AGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTG 69276 ||||||| |||||||| | ||| ||| | | | ||||||| ||||| | Sbjct 461 TGCTGCATTTGGTGGCTTTAAGCCTGAGGCAGCTACATTACAACGGAATAGAGTATCCAG 402 Query 69277 CATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACA 69313 || | |||| ||||| ||||||||||||||||| Sbjct 401 CACCCAAGAGATATTACAGAGGGGAGGCCTTCAAACA 365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368757623236688