Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq48423 95.1 3e-14 seq156139 86.0 1e-11 seq60932 86.0 1e-11 >seq48423 Length=831 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 |||||||||| ||| || ||||| || || || ||||| || |||||||||||||| Sbjct 1 GCAAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTTGCTTTA 60 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | || || ||||| | || || || || ||||| ||||| || |||| ||| Sbjct 61 ACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTC 120 Query 283083 TTAACGAATATCTGCATTTT 283102 || ||||| ||||||||||| Sbjct 121 TTCACGAAGATCTGCATTTT 140 >seq156139 Length=1311 Score = 86.0 bits (94), Expect = 1e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || |||| |||||||||||||| || ||||| || | ||||||||||| | || | Sbjct 1119 GAGTACCTTCCTTGTCTTGGATTTTAGCTTTCACATTGTCGATAGTGTCACTGGGCTCCA 1060 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 | ||||| ||||| || |||||||||| || || || || |||||||| || Sbjct 1059 CCTCGAGGGTGATGGTTTTACCCGTCAGCGTTTTCACAAAAATCTGCATCTT 1008 >seq60932 Length=4876 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| || |||||||| |||||||| ||||| ||| | || || ||||| | ||| Sbjct 4710 GGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCGCTGGGTTCA 4769 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| ||||| || || | ||||||||||| |||||||| Sbjct 4770 ACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1044506908280992